RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 TAC3Q9UHF0 121 aa11.73□□□□□ -0.53
RFC5-201ENST00000392542 PNMA8BQ9ULN7 279 aaPredicted RBP11.73□□□□□ -0.53
RFC5-201ENST00000392542 WBP11Q9Y2W2 641 aaKnown RBP11.73□□□□□ -0.53
RFC5-201ENST00000392542 SNX8Q9Y5X2 465 aa11.73□□□□□ -0.53
RFC5-201ENST00000392542 ANKDD1BA6NHY2 528 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 STSP08842 583 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 PORP16435 677 aaPredicted RBP11.72□□□□□ -0.53
RFC5-201ENST00000392542 MAPK12P53778 367 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 HTRA3P83110 453 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 ZNF234Q14588 700 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 GAB4Q2WGN9 574 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 CEACAM20Q6UY09 585 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 ADAMTSL4Q6UY14 1074 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 PAGE2Q7Z2X7 111 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 STX19Q8N4C7 294 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 ZNF675Q8TD23 568 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 GTPBP3Q969Y2 492 aaKnown RBP11.72□□□□□ -0.53
RFC5-201ENST00000392542 TM4SF18Q96CE8 201 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 ZFYVE19Q96K21 471 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 MAPKAP1Q9BPZ7 522 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 AIF1LQ9BQI0 150 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 A4GALTQ9NPC4 353 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 KCND3Q9UK17 655 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 TMEM247A6NEH6 219 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 HEPACAM2A8MVW5 462 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 C5orf58C9J3I9 102 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 RTCAO00442 366 aaKnown RBP11.72□□□□□ -0.53
RFC5-201ENST00000392542 PDPK1O15530 556 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 NFATC1O95644 943 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 POU2F1P14859 743 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 FUT4P22083 530 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 GADD45AP24522 165 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 CXCR2P25025 360 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 BSGP35613 385 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 CYP4F2P78329 520 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 UBE3AQ05086 875 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 IRF3Q14653 427 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 ARHGAP19Q14CB8 494 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 EIF4HQ15056 248 aaKnown RBP11.72□□□□□ -0.53
RFC5-201ENST00000392542 DUSP7Q16829 419 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 FBXO43Q4G163 708 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 FAM180BQ6P0A1 224 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 HORMAD2Q8N7B1 307 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 ANKRD53Q8N9V6 530 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 AQP11Q8NBQ7 271 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 MCFD2Q8NI22 146 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 F2RL3Q96RI0 385 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 DSN1Q9H410 356 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 ARMC7Q9H6L4 198 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 ZBTB20Q9HC78 741 aaPredicted RBP11.72□□□□□ -0.53
RFC5-201ENST00000392542 SLAMF7Q9NQ25 335 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 WASH6PQ9NQA3 447 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 CUEDC1Q9NWM3 386 aaPredicted RBP11.72□□□□□ -0.53
RFC5-201ENST00000392542 CHCHD3Q9NX63 227 aaKnown RBP11.72□□□□□ -0.53
RFC5-201ENST00000392542 FTSJ1Q9UET6 329 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 SLC23A2Q9UGH3 650 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 CCDC88CQ9P219 2028 aa11.72□□□□□ -0.53
RFC5-201ENST00000392542 MKI67P46013 3256 aaKnown RBP11.71□□□□□ -0.53
RFC5-201ENST00000392542 METTL15A6NJ78 407 aa11.71□□□□□ -0.53
RFC5-201ENST00000392542 M0R129 80 aa11.71□□□□□ -0.53
RFC5-201ENST00000392542 CAPN5O15484 640 aaPredicted RBP11.71□□□□□ -0.53
RFC5-201ENST00000392542 POU2F2P09086 479 aa11.71□□□□□ -0.53
RFC5-201ENST00000392542 ADORA3P0DMS8 318 aa11.71□□□□□ -0.53
RFC5-201ENST00000392542 CDC42P60953 191 aa11.71□□□□□ -0.53
RFC5-201ENST00000392542 REEP5Q00765 189 aa11.71□□□□□ -0.53
RFC5-201ENST00000392542 CAMK1Q14012 370 aa11.71□□□□□ -0.53
RFC5-201ENST00000392542 PUM1Q14671 1186 aaKnown RBP eCLIP11.71□□□□□ -0.53
RFC5-201ENST00000392542 PTGES3Q15185 160 aaKnown RBP11.71□□□□□ -0.53
RFC5-201ENST00000392542 RPS26P11Q5JNZ5 115 aaPredicted RBP11.71□□□□□ -0.53
RFC5-201ENST00000392542 USP43Q70EL4 1123 aa11.71□□□□□ -0.53
RFC5-201ENST00000392542 LRRTM4Q86VH4 590 aa11.71□□□□□ -0.53
RFC5-201ENST00000392542 SNX29P2Q8IUI4 249 aa11.71□□□□□ -0.53
RFC5-201ENST00000392542 MMAAQ8IVH4 418 aaKnown RBP11.71□□□□□ -0.53
RFC5-201ENST00000392542 TAGAPQ8N103 731 aa11.71□□□□□ -0.53
RFC5-201ENST00000392542 OR5K2Q8NHB8 316 aa11.71□□□□□ -0.53
RFC5-201ENST00000392542 APOBEC4Q8WW27 367 aaKnown RBP11.71□□□□□ -0.53
RFC5-201ENST00000392542 NRTNQ99748 197 aa11.71□□□□□ -0.53
RFC5-201ENST00000392542 NEURL2Q9BR09 285 aa11.71□□□□□ -0.53
RFC5-201ENST00000392542 TMEM245Q9H330 911 aa11.71□□□□□ -0.53
RFC5-201ENST00000392542 NMNAT1Q9HAN9 279 aaPredicted RBP11.71□□□□□ -0.53
RFC5-201ENST00000392542 TRNAU1APQ9NX07 287 aaKnown RBP11.71□□□□□ -0.53
RFC5-201ENST00000392542 KRBA1A5PL33 1030 aa11.71□□□□□ -0.54
RFC5-201ENST00000392542 OTOL1A6NHN0 477 aaPredicted RBP11.71□□□□□ -0.54
RFC5-201ENST00000392542 ZAR1LA6NP61 321 aa11.71□□□□□ -0.54
RFC5-201ENST00000392542 C1QTNF3-AMACRE9PGA6 284 aa11.71□□□□□ -0.54
RFC5-201ENST00000392542 TLL1O43897 1013 aa11.71□□□□□ -0.54
RFC5-201ENST00000392542 PTHP01270 115 aa11.71□□□□□ -0.54
RFC5-201ENST00000392542 GASTP01350 101 aa11.71□□□□□ -0.54
RFC5-201ENST00000392542 RPN2P04844 631 aa11.71□□□□□ -0.54
RFC5-201ENST00000392542 BCHEP06276 602 aa11.71□□□□□ -0.54
RFC5-201ENST00000392542 DDX5P17844 614 aaKnown RBP11.71□□□□□ -0.54
RFC5-201ENST00000392542 HSD17B2P37059 387 aa11.71□□□□□ -0.54
RFC5-201ENST00000392542 P2RY2P41231 377 aa11.71□□□□□ -0.54
RFC5-201ENST00000392542 ALDH9A1P49189 494 aa11.71□□□□□ -0.54
RFC5-201ENST00000392542 CCR8P51685 355 aa11.71□□□□□ -0.54
RFC5-201ENST00000392542 CRISP1P54107 249 aa11.71□□□□□ -0.54
RFC5-201ENST00000392542 MANFP55145 182 aaKnown RBP11.71□□□□□ -0.54
RFC5-201ENST00000392542 RPS26P62854 115 aaKnown RBP11.71□□□□□ -0.54
RFC5-201ENST00000392542 FPGSQ05932 587 aa11.71□□□□□ -0.54
RFC5-201ENST00000392542 ST3GAL4Q11206 333 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms