RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 RPS26P62854 115 aaKnown RBP15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 BCL7AQ4VC05 210 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 SPANXN2Q5MJ10 180 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 RSBN1Q5VWQ0 802 aaPredicted RBP15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 GRHL2Q6ISB3 625 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 ARMCX6Q7L4S7 300 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 MMAAQ8IVH4 418 aaKnown RBP15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 IL17RDQ8NFM7 739 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 CHTF18Q8WVB6 975 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 COQ8BQ96D53 544 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 RAD9AQ99638 391 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 SLX1AQ9BQ83 275 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 OR51B5Q9H339 312 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 EXOSC4Q9NPD3 245 aaKnown RBP15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 CLEC2DQ9UHP7 191 aa15.53■□□□□ 0.08
NKX3-1-201ENST00000380871 SERTM1A2A2V5 107 aa15.52■□□□□ 0.08
NKX3-1-201ENST00000380871 WWP2O00308 870 aa15.52■□□□□ 0.08
NKX3-1-201ENST00000380871 TIA1P31483 386 aaKnown RBP eCLIP15.52■□□□□ 0.08
NKX3-1-201ENST00000380871 GJA8P48165 433 aa15.52■□□□□ 0.08
NKX3-1-201ENST00000380871 GCNT6Q5T4J0 391 aa15.52■□□□□ 0.08
NKX3-1-201ENST00000380871 VN1R2Q8NFZ6 395 aa15.52■□□□□ 0.08
NKX3-1-201ENST00000380871 TRMT61AQ96FX7 289 aaKnown RBP15.52■□□□□ 0.08
NKX3-1-201ENST00000380871 ZNF486Q96H40 463 aaPredicted RBP15.52■□□□□ 0.08
NKX3-1-201ENST00000380871 SORBS1Q9BX66 1292 aaKnown RBP15.52■□□□□ 0.08
NKX3-1-201ENST00000380871 NEK6Q9HC98 313 aa15.52■□□□□ 0.08
NKX3-1-201ENST00000380871 PPIL1Q9Y3C6 166 aa15.52■□□□□ 0.08
NKX3-1-201ENST00000380871 TTC36A6NLP5 189 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 H0YIV9 168 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 H3BQ06 376 aaPredicted RBP15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 EIF3FO00303 357 aaPredicted RBP15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 RGS5O15539 181 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 CCNKO75909 580 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 RECKO95980 971 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 GSTM1P09488 218 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 ANXA8P13928 327 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 CHMP24386 653 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 SOAT1P35610 550 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 PXNP49023 591 aaPredicted RBP15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 PTPN5P54829 565 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 TEAD4Q15561 434 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 DUSP7Q16829 419 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 UAP1L1Q3KQV9 507 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 RPS26P11Q5JNZ5 115 aaPredicted RBP15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 GATAD2AQ86YP4 633 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 OR8H2Q8N162 312 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 FOPNLQ96NB1 174 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 CNPPD1Q9BV87 410 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 IGFLR1Q9H665 355 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 SAGE1Q9NXZ1 904 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 ITGB1BP2Q9UKP3 347 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 TBC1D24Q9ULP9 559 aa15.52■□□□□ 0.07
NKX3-1-201ENST00000380871 LOC110117498-PIK3R3F6TDL0 507 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 ZNF30P17039 623 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 COMMD6Q7Z4G1 85 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 DENND6BQ8NEG7 585 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 KLK6Q92876 244 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 BARHL1Q9BZE3 327 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 SPNS1Q9H2V7 528 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 ZNF556Q9HAH1 456 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 ZNF282Q9UDV7 671 aaPredicted RBP15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 TBC1D3BA6NDS4 549 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 KIAA0355O15063 1070 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 C21orf58P58505 322 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 HENMT1Q5T8I9 393 aaKnown RBP15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 PTCHD4Q6ZW05 846 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 NRARPQ7Z6K4 114 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 CCDC190Q86UF4 302 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 SLC44A2Q8IWA5 706 aaPredicted RBP15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 TRAM1L1Q8N609 369 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 RSPO3Q9BXY4 272 aaPredicted RBP15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 RNASET2O00584 256 aaKnown RBP15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 SLCO2B1O94956 709 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 GADD45GO95257 159 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 ASMTP46597 345 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 CDK6Q00534 326 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 CAMK1Q14012 370 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 FBXO43Q4G163 708 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 ANXA8L1Q5VT79 327 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 VPS35Q96QK1 796 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 C19orf43Q9BQ61 176 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 ZSCAN5AQ9BUG6 496 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 TPK1Q9H3S4 243 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 C1GALT1Q9NS00 363 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 DNAJC27Q9NZQ0 273 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 MAFFQ9ULX9 164 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 PEX16Q9Y5Y5 336 aa15.51■□□□□ 0.07
NKX3-1-201ENST00000380871 TRBV4-1A0A0J9YWV2 114 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 SLC16A5O15375 505 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 UGDHO60701 494 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 CHRM5P08912 532 aaPredicted RBP15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 TNFSF8P32971 234 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 CHI3L1P36222 383 aaPredicted RBP15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 XCR1P46094 333 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 FAM109BQ6ICB4 259 aaPredicted RBP15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 ADGRD2Q7Z7M1 963 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 DEPDC4Q8N2C3 294 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 ZNF740Q8NDX6 193 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 RERGLQ9H628 205 aa15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 NMNAT1Q9HAN9 279 aaPredicted RBP15.5■□□□□ 0.07
NKX3-1-201ENST00000380871 MUTYHQ9UIF7 546 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms