RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 NDUFAF4Q9P032 175 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 STOX2Q9P2F5 926 aaPredicted RBP13.24□□□□□ -0.29
SF1-205ENST00000377394 SLC23A1Q9UHI7 598 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 EXO1Q9UQ84 846 aaKnown RBP13.24□□□□□ -0.29
SF1-205ENST00000377394 V9GYH0 126 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 CCDC182A6NF36 153 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 B4DXG7 233 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 H3BUI4 141 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 M0R129 80 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 PLK4O00444 970 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 TSC22D2O75157 780 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 ANXA4P09525 319 aaPredicted RBP13.24□□□□□ -0.29
SF1-205ENST00000377394 HSD3B1P14060 373 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 ZNF250P15622 560 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 ATF4P18848 351 aaPredicted RBP13.24□□□□□ -0.29
SF1-205ENST00000377394 HSD3B2P26439 372 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 GGT2P36268 569 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 MVDP53602 400 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 PCDH1Q08174 1060 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 TBCEQ15813 527 aaPredicted RBP13.24□□□□□ -0.29
SF1-205ENST00000377394 MLIPQ5VWP3 458 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 LAMTOR1Q6IAA8 161 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 DEFB128Q7Z7B8 93 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 PXYLP1Q8TE99 480 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 CHTF18Q8WVB6 975 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 TMEM169Q96HH4 297 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 SMURF1Q9HCE7 757 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 HMX1Q9NP08 348 aaPredicted RBP13.24□□□□□ -0.29
SF1-205ENST00000377394 PLCXD1Q9NUJ7 323 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 GPATCH2Q9NW75 528 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 FAM8A1Q9UBU6 413 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 HSPB11Q9Y547 144 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 AP1M2Q9Y6Q5 423 aa13.24□□□□□ -0.29
SF1-205ENST00000377394 OR2AG2A6NM03 316 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 H3BM21 787 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 OR2B3O76000 313 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 NAT2P11245 290 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 PPIBP23284 216 aaKnown RBP13.23□□□□□ -0.29
SF1-205ENST00000377394 ASMTP46597 345 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 GZMKP49863 264 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 SPOUT1Q5T280 376 aaKnown RBP13.23□□□□□ -0.29
SF1-205ENST00000377394 Q6ZVU0 165 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 KLHDC8AQ8IYD2 350 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 ST13P5Q8NFI4 369 aaPredicted RBP13.23□□□□□ -0.29
SF1-205ENST00000377394 FCGR1BQ92637 280 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 MRPS31Q92665 395 aaKnown RBP13.23□□□□□ -0.29
SF1-205ENST00000377394 FEVQ99581 238 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 C17orf62Q9BQA9 187 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 BARHL1Q9BZE3 327 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 SMG9Q9H0W8 520 aaKnown RBP13.23□□□□□ -0.29
SF1-205ENST00000377394 C11orf54Q9H0W9 315 aaPredicted RBP13.23□□□□□ -0.29
SF1-205ENST00000377394 FAM83DQ9H4H8 585 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 CORO2BQ9UQ03 480 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 TRAPPC4Q9Y296 219 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 RWDD3Q9Y3V2 267 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 LEFTY2O00292 366 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 ARHGEF9O43307 516 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 OR7A10O76100 309 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 AP2A2O94973 939 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 TRAPPC2P0DI81 140 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 TRAPPC2BP0DI82 140 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 CTSAP10619 480 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 GJA1P17302 382 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 ERP29P30040 261 aaKnown RBP13.23□□□□□ -0.29
SF1-205ENST00000377394 RPS5P46782 204 aaKnown RBP13.23□□□□□ -0.29
SF1-205ENST00000377394 MAPK12P53778 367 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 SELENOWP63302 87 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 TAGLNQ01995 201 aaKnown RBP13.23□□□□□ -0.29
SF1-205ENST00000377394 ELP6Q0PNE2 266 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 ANXA8L1Q5VT79 327 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 TMC8Q8IU68 726 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 DNAJC22Q8N4W6 341 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 SLC5A8Q8N695 610 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 VANGL1Q8TAA9 524 aaPredicted RBP13.23□□□□□ -0.29
SF1-205ENST00000377394 SETD6Q8TBK2 473 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 MED8Q96G25 268 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 OR5M11Q96RB7 305 aa13.23□□□□□ -0.29
SF1-205ENST00000377394 TNFRSF11BO00300 401 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 URODP06132 367 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 ADRA2AP08913 450 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 TNFRSF1BP20333 461 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 PPIGQ13427 754 aaKnown RBP eCLIP13.22□□□□□ -0.295e-11■□□□□ 9.8
SF1-205ENST00000377394 ZNF385BQ569K4 471 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 COX20Q5RI15 118 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 GDPD4Q6W3E5 623 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 ZNF852Q6ZMS4 543 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 Q6ZVL8 140 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 LILRA3Q8N6C8 439 aaPredicted RBP13.22□□□□□ -0.29
SF1-205ENST00000377394 C11orf65Q8NCR3 313 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 VPS37AQ8NEZ2 397 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 TOR1AIP2Q8NFQ8 470 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 NLGN4YQ8NFZ3 816 aaPredicted RBP13.22□□□□□ -0.29
SF1-205ENST00000377394 OR7G3Q8NG95 312 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 OR4C15Q8NGM1 316 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 HUS1BQ8NHY5 278 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 FAM83CQ9BQN1 747 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 RAD18Q9NS91 495 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 RLIMQ9NVW2 624 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 GLTPQ9NZD2 209 aa13.22□□□□□ -0.29
SF1-205ENST00000377394 CIB4A0PJX0 185 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms