RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 HCAR2Q8TDS4 363 aa24.13■■□□□ 1.45
C9orf40-201ENST00000376854 NLNQ9BYT8 704 aa24.13■■□□□ 1.45
C9orf40-201ENST00000376854 CLN6Q9NWW5 311 aa24.13■■□□□ 1.45
C9orf40-201ENST00000376854 TBC1D14Q9P2M4 693 aa24.13■■□□□ 1.45
C9orf40-201ENST00000376854 K7ESM1 405 aa24.13■■□□□ 1.45
C9orf40-201ENST00000376854 MPZL2O60487 215 aa24.13■■□□□ 1.45
C9orf40-201ENST00000376854 ADRA2AP08913 450 aa24.13■■□□□ 1.45
C9orf40-201ENST00000376854 UQCRC2P22695 453 aa24.13■■□□□ 1.45
C9orf40-201ENST00000376854 POU1F1P28069 291 aa24.13■■□□□ 1.45
C9orf40-201ENST00000376854 GTF2E2P29084 291 aaKnown RBP24.13■■□□□ 1.45
C9orf40-201ENST00000376854 CNR2P34972 360 aa24.13■■□□□ 1.45
C9orf40-201ENST00000376854 PLPP4Q5VZY2 271 aa24.13■■□□□ 1.45
C9orf40-201ENST00000376854 IKBIPQ70UQ0 350 aa24.13■■□□□ 1.45
C9orf40-201ENST00000376854 SLC30A8Q8IWU4 369 aa24.13■■□□□ 1.45
C9orf40-201ENST00000376854 COQ10AQ96MF6 247 aa24.13■■□□□ 1.45
C9orf40-201ENST00000376854 ZCCHC2Q9C0B9 1178 aaKnown RBP24.13■■□□□ 1.45
C9orf40-201ENST00000376854 CRISPLD2Q9H0B8 497 aa24.13■■□□□ 1.45
C9orf40-201ENST00000376854 CXorf36Q9H7Y0 433 aa24.13■■□□□ 1.45
C9orf40-201ENST00000376854 CNOT2Q9NZN8 540 aaKnown RBP24.13■■□□□ 1.45
C9orf40-201ENST00000376854 ARRDC5A6NEK1 342 aa24.12■■□□□ 1.45
C9orf40-201ENST00000376854 DLGAP3O95886 979 aa24.12■■□□□ 1.45
C9orf40-201ENST00000376854 TIMP1P01033 207 aa24.12■■□□□ 1.45
C9orf40-201ENST00000376854 FRMPD2BQ6IN97 320 aa24.12■■□□□ 1.45
C9orf40-201ENST00000376854 REEP3Q6NUK4 255 aa24.12■■□□□ 1.45
C9orf40-201ENST00000376854 MGLLQ99685 303 aa24.12■■□□□ 1.45
C9orf40-201ENST00000376854 TMEM165Q9HC07 324 aa24.12■■□□□ 1.45
C9orf40-201ENST00000376854 QPCTLQ9NXS2 382 aa24.12■■□□□ 1.45
C9orf40-201ENST00000376854 PEX16Q9Y5Y5 336 aa24.12■■□□□ 1.45
C9orf40-201ENST00000376854 PSMD11O00231 422 aa24.12■■□□□ 1.45
C9orf40-201ENST00000376854 DDX6P26196 483 aaKnown RBP eCLIP24.12■■□□□ 1.45
C9orf40-201ENST00000376854 DGKEP52429 567 aa24.12■■□□□ 1.45
C9orf40-201ENST00000376854 TSTQ16762 297 aaKnown RBP24.12■■□□□ 1.45
C9orf40-201ENST00000376854 ARHGAP15Q53QZ3 475 aa24.12■■□□□ 1.45
C9orf40-201ENST00000376854 RPS26P11Q5JNZ5 115 aaPredicted RBP24.12■■□□□ 1.45
C9orf40-201ENST00000376854 SLC44A2Q8IWA5 706 aaPredicted RBP24.12■■□□□ 1.45
C9orf40-201ENST00000376854 UBE2E3Q969T4 207 aa24.12■■□□□ 1.45
C9orf40-201ENST00000376854 GPC6Q9Y625 555 aaPredicted RBP24.12■■□□□ 1.45
C9orf40-201ENST00000376854 FAM227AF5H4B4 570 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 MED26O95402 600 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 TPTEP56180 551 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 PUM1Q14671 1186 aaKnown RBP eCLIP24.11■■□□□ 1.456e-6■■■■□ 24.2
C9orf40-201ENST00000376854 ZNF77Q15935 545 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 ZNF770Q6IQ21 691 aaPredicted RBP24.11■■□□□ 1.45
C9orf40-201ENST00000376854 TMIGD1Q6UXZ0 262 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 CEACAM20Q6UY09 585 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 VN1R5Q7Z5H4 357 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 HEATR4Q86WZ0 1026 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 ZSWIM3Q96MP5 696 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 KCND3Q9UK17 655 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 FFAR1O14842 300 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 KIAA0513O60268 411 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 DNTTP04053 509 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 ALOX12P18054 663 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 SOX6P35712 828 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 METAP1P53582 386 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 RPS26P62854 115 aaKnown RBP24.11■■□□□ 1.45
C9orf40-201ENST00000376854 SELENBP1Q13228 472 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 TOR1AIP1Q5JTV8 583 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 PLAG1Q6DJT9 500 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 CYP4Z2PQ8N1L4 340 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 WDR36Q8NI36 951 aaKnown RBP24.11■■□□□ 1.45
C9orf40-201ENST00000376854 IL17FQ96PD4 163 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 ICKQ9UPZ9 632 aa24.11■■□□□ 1.45
C9orf40-201ENST00000376854 LIM2P55344 173 aa24.1■■□□□ 1.45
C9orf40-201ENST00000376854 RAET1GQ6H3X3 334 aa24.1■■□□□ 1.45
C9orf40-201ENST00000376854 C2orf73Q8N5S3 287 aaPredicted RBP24.1■■□□□ 1.45
C9orf40-201ENST00000376854 FAM46DQ8NEK8 389 aa24.1■■□□□ 1.45
C9orf40-201ENST00000376854 PDXPQ96GD0 296 aa24.1■■□□□ 1.45
C9orf40-201ENST00000376854 SPATA7Q9P0W8 599 aa24.1■■□□□ 1.45
C9orf40-201ENST00000376854 TRBV4-1A0A0J9YWV2 114 aa24.1■■□□□ 1.45
C9orf40-201ENST00000376854 C5orf58C9J3I9 102 aa24.1■■□□□ 1.45
C9orf40-201ENST00000376854 KCNK2O95069 426 aa24.1■■□□□ 1.45
C9orf40-201ENST00000376854 PTTG1O95997 202 aa24.1■■□□□ 1.45
C9orf40-201ENST00000376854 BCHEP06276 602 aa24.1■■□□□ 1.45
C9orf40-201ENST00000376854 RHOP08100 348 aa24.1■■□□□ 1.45
C9orf40-201ENST00000376854 TIMM50Q3ZCQ8 353 aa24.1■■□□□ 1.45
C9orf40-201ENST00000376854 PRAMEF14Q5SWL7 426 aa24.1■■□□□ 1.45
C9orf40-201ENST00000376854 PRAMEF13Q5VWM6 474 aa24.1■■□□□ 1.45
C9orf40-201ENST00000376854 TNFAIP8L2Q6P589 184 aaPredicted RBP24.1■■□□□ 1.45
C9orf40-201ENST00000376854 C19orf48Q6RUI8 117 aa24.1■■□□□ 1.45
C9orf40-201ENST00000376854 SLC9B2Q86UD5 537 aa24.1■■□□□ 1.45
C9orf40-201ENST00000376854 CCRL2O00421 344 aa24.09■■□□□ 1.45
C9orf40-201ENST00000376854 HAT1O14929 419 aa24.09■■□□□ 1.45
C9orf40-201ENST00000376854 SPINT1O43278 529 aa24.09■■□□□ 1.45
C9orf40-201ENST00000376854 PI15O43692 258 aa24.09■■□□□ 1.45
C9orf40-201ENST00000376854 MAGP20916 626 aa24.09■■□□□ 1.45
C9orf40-201ENST00000376854 GPR1P46091 355 aa24.09■■□□□ 1.45
C9orf40-201ENST00000376854 NFE2L1Q14494 772 aa24.09■■□□□ 1.45
C9orf40-201ENST00000376854 LEXMQ3ZCV2 418 aa24.09■■□□□ 1.45
C9orf40-201ENST00000376854 ATCAYQ86WG3 371 aa24.09■■□□□ 1.45
C9orf40-201ENST00000376854 ZNF547Q8IVP9 402 aa24.09■■□□□ 1.45
C9orf40-201ENST00000376854 CLIP4Q8N3C7 705 aa24.09■■□□□ 1.45
C9orf40-201ENST00000376854 HORMAD2Q8N7B1 307 aa24.09■■□□□ 1.45
C9orf40-201ENST00000376854 SETD7Q8WTS6 366 aaKnown RBP24.09■■□□□ 1.45
C9orf40-201ENST00000376854 MIR1-1HGQ9H1L0 117 aa24.09■■□□□ 1.45
C9orf40-201ENST00000376854 C11orf16Q9NQ32 467 aa24.09■■□□□ 1.45
C9orf40-201ENST00000376854 MARK1Q9P0L2 795 aa24.09■■□□□ 1.45
C9orf40-201ENST00000376854 PLAGL1Q9UM63 463 aa24.09■■□□□ 1.45
C9orf40-201ENST00000376854 PCDHGA4Q9Y5G9 962 aa24.09■■□□□ 1.45
C9orf40-201ENST00000376854 POP7O75817 140 aaKnown RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms