RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 TMEM38AQ9H6F2 299 aa11.52□□□□□ -0.57
HMGCL-202ENST00000374487 C1GALT1Q9NS00 363 aa11.52□□□□□ -0.57
HMGCL-202ENST00000374487 IMP3Q9NV31 184 aaKnown RBP11.52□□□□□ -0.57
HMGCL-202ENST00000374487 TMEM9Q9P0T7 183 aa11.52□□□□□ -0.57
HMGCL-202ENST00000374487 SPATA7Q9P0W8 599 aa11.52□□□□□ -0.57
HMGCL-202ENST00000374487 TAAR2Q9P1P5 351 aa11.52□□□□□ -0.57
HMGCL-202ENST00000374487 WARS2Q9UGM6 360 aaKnown RBP11.52□□□□□ -0.57
HMGCL-202ENST00000374487 MOSPD1Q9UJG1 213 aa11.52□□□□□ -0.57
HMGCL-202ENST00000374487 A0A1B0GVG6 124 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 A0A1W2PQF6 199 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 M0QX08 132 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 ADAMDEC1O15204 470 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 HRO43593 1189 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 OR1F1O43749 312 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 DPM1O60762 260 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 SEC14L2O76054 403 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 DDCP20711 480 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 MATN1P21941 496 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 SERPINB1P30740 379 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 TRIM23P36406 574 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 CLK3P49761 638 aaKnown RBP11.51□□□□□ -0.57
HMGCL-202ENST00000374487 TMBIM6P55061 237 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 RPS21P63220 83 aaKnown RBP11.51□□□□□ -0.57
HMGCL-202ENST00000374487 ZNF630Q2M218 657 aaPredicted RBP11.51□□□□□ -0.57
HMGCL-202ENST00000374487 IFI44LQ53G44 452 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 KIAA1614Q5VZ46 1190 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 LAIR2Q6ISS4 152 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 FAM180BQ6P0A1 224 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 SYT13Q7L8C5 426 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 RLN3Q8WXF3 142 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 ZNF347Q96SE7 839 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 MYOCQ99972 504 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 NAA50Q9GZZ1 169 aaKnown RBP11.51□□□□□ -0.57
HMGCL-202ENST00000374487 WASH6PQ9NQA3 447 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 SCN3BQ9NY72 215 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 MMP17Q9ULZ9 603 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 TESMINQ9Y4I5 508 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 HSPE1-MOB4S4R3N1 261 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 CACNA1HO95180 2353 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 TNFRSF11BO00300 401 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 CAPN5O15484 640 aaPredicted RBP11.51□□□□□ -0.57
HMGCL-202ENST00000374487 XPNPEP2O43895 674 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 SH3BP5O60239 455 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 SERPIND1P05546 499 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 DDX5P17844 614 aaKnown RBP11.51□□□□□ -0.57
HMGCL-202ENST00000374487 TNFRSF1BP20333 461 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 UQCRC2P22695 453 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 OR1E2P47887 323 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 MAPK10P53779 464 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 MANFP55145 182 aaKnown RBP11.51□□□□□ -0.57
HMGCL-202ENST00000374487 DCTN2Q13561 401 aaKnown RBP11.51□□□□□ -0.57
HMGCL-202ENST00000374487 ELOAQ14241 798 aaKnown RBP11.51□□□□□ -0.57
HMGCL-202ENST00000374487 AGERQ15109 404 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 PRSS53Q2L4Q9 553 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 IQCCQ4KMZ1 466 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 ZNF776Q68DI1 518 aaPredicted RBP11.51□□□□□ -0.57
HMGCL-202ENST00000374487 TSPYL5Q86VY4 417 aaPredicted RBP11.51□□□□□ -0.57
HMGCL-202ENST00000374487 FAM160A2Q8N612 972 aaPredicted RBP11.51□□□□□ -0.57
HMGCL-202ENST00000374487 OR14C36Q8NHC7 312 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 HMGB4Q8WW32 186 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 TMEM121BQ9BXQ6 578 aaPredicted RBP11.51□□□□□ -0.57
HMGCL-202ENST00000374487 MS4A8Q9BY19 250 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 DGCR6LQ9BY27 220 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 FBXL12Q9NXK8 326 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 NDUFAF4Q9P032 175 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 ZFR2Q9UPR6 939 aaKnown RBP11.51□□□□□ -0.57
HMGCL-202ENST00000374487 ICKQ9UPZ9 632 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 WDR37Q9Y2I8 494 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 TPRKBQ9Y3C4 175 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 DGKBQ9Y6T7 804 aa11.51□□□□□ -0.57
HMGCL-202ENST00000374487 A0A1W2PPW3 197 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 LATO43561 262 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 HTR1AP08908 422 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 ITGA2P17301 1181 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 CCNA2P20248 432 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 FMO3P31513 532 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 BSGP35613 385 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 MRPS21P82921 87 aaKnown RBP11.5□□□□□ -0.57
HMGCL-202ENST00000374487 NPRL3Q12980 569 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 ENPP2Q13822 863 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 FGD3Q5JSP0 725 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 FAHD1Q6P587 224 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 GIPC3Q8TF64 312 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 FBLIM1Q8WUP2 373 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 RGMAQ96B86 450 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 TAMM41Q96BW9 452 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 INSM2Q96T92 566 aaPredicted RBP11.5□□□□□ -0.57
HMGCL-202ENST00000374487 MENTQ9BUN1 341 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 PITHD1Q9GZP4 211 aaPredicted RBP11.5□□□□□ -0.57
HMGCL-202ENST00000374487 FBXO4Q9UKT5 387 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 NDRG4Q9ULP0 352 aaKnown RBP11.5□□□□□ -0.57
HMGCL-202ENST00000374487 KCNK6Q9Y257 313 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 ANGPT4Q9Y264 503 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 WBP11Q9Y2W2 641 aaKnown RBP11.5□□□□□ -0.57
HMGCL-202ENST00000374487 A0A1W2PPV9 198 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 TCRBV21S2A2A0A5A6 115 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 TMEM229AB2RXF0 380 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 PDPK1O15530 556 aa11.5□□□□□ -0.57
HMGCL-202ENST00000374487 TBX6O95947 436 aaPredicted RBP11.5□□□□□ -0.57
HMGCL-202ENST00000374487 FUCA1P04066 466 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms