RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 PCDHB1Q9Y5F3 818 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 IFRD1O00458 451 aaPredicted RBP16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 PPM1BO75688 479 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 AQP1P29972 269 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 NRIP1P48552 1158 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 AP1S1P61966 158 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 KIAA0040Q15053 153 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 ZNF680Q8NEM1 530 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 AKAP1Q92667 903 aaKnown RBP eCLIP16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 BRD9Q9H8M2 597 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 HEBP1Q9NRV9 189 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 ING3Q9NXR8 418 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 LSM7Q9UK45 103 aaKnown RBP16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 TNPO3Q9Y5L0 923 aaKnown RBP16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 SMIM30A4D0T7 59 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 H3BM21 787 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 RGS14O43566 566 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 C8AP07357 584 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 RPS3P23396 243 aaKnown RBP eCLIP16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 MRPL19P49406 292 aaKnown RBP16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 VLDLRP98155 873 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 KDM4DQ6B0I6 523 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 TEX261Q6UWH6 196 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 GLCCI1Q86VQ1 547 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 COMMD7Q86VX2 200 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 VANGL1Q8TAA9 524 aaPredicted RBP16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 SPNS1Q9H2V7 528 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 ELOVL6Q9H5J4 265 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 RAD18Q9NS91 495 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 KRT84Q9NSB2 600 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 IL20Q9NYY1 176 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 ALG5Q9Y673 324 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 U3KQ87 197 aa16.56■□□□□ 0.24
LDLRAP1-201ENST00000374338 COL4A6Q14031 1691 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 CPSF4O95639 269 aaKnown RBP16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 EFEMP2O95967 443 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 LRG1P02750 347 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 IDH2P48735 452 aaKnown RBP16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 POU4F3Q15319 338 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 CERS6Q6ZMG9 384 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 CCDC149Q6ZUS6 474 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 ZNF551Q7Z340 670 aaPredicted RBP16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 P3H2Q8IVL5 708 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 LAX1Q8IWV1 398 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 USB1Q9BQ65 265 aaKnown RBP16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 SUV39H2Q9H5I1 410 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 RERGLQ9H628 205 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 IFT22Q9H7X7 185 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 CPNE7Q9UBL6 633 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 PPT2Q9UMR5 302 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 EFCAB10A6NFE3 127 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 HIDE1A8MVS5 230 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 C1SP09871 688 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 MESP2Q0VG99 397 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 BTN1A1Q13410 526 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 RAB33AQ14088 237 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 FAM120BQ96EK7 910 aaKnown RBP16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 ZBTB18Q99592 522 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 PPIL3Q9H2H8 161 aaKnown RBP16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 SAMHD1Q9Y3Z3 626 aaKnown RBP16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 KLK4Q9Y5K2 254 aa16.55■□□□□ 0.24
LDLRAP1-201ENST00000374338 ATG2BQ96BY7 2078 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 SAP18O00422 153 aaKnown RBP16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 TRIM3O75382 744 aaPredicted RBP16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 LIPIQ6XZB0 460 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 SLC39A5Q6ZMH5 540 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 HSD11B1LQ7Z5J1 315 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 SLAIN1Q8ND83 568 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 GPR156Q8NFN8 814 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 OVCA2Q8WZ82 227 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 PYURFQ96I23 114 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 EXOSC4Q9NPD3 245 aaKnown RBP16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 PSORS1C1Q9UIG5 152 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 WNT6Q9Y6F9 365 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 KNL1Q8NG31 2342 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 CLDN9O95484 217 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 ANXA5P08758 320 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 ADRA2AP08913 450 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 FBXO43Q4G163 708 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 IGSF11Q5DX21 431 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 ZNF782Q6ZMW2 699 aaPredicted RBP16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 HDDC2Q7Z4H3 204 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 GPAT4Q86UL3 456 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 CLECL1Q8IZS7 167 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 SPG21Q9NZD8 308 aa16.54■□□□□ 0.24
LDLRAP1-201ENST00000374338 NINQ8N4C6 2090 aa16.53■□□□□ 0.24
LDLRAP1-201ENST00000374338 CSF3P09919 207 aa16.53■□□□□ 0.24
LDLRAP1-201ENST00000374338 SSTR4P31391 388 aa16.53■□□□□ 0.24
LDLRAP1-201ENST00000374338 KCNC3Q14003 757 aa16.53■□□□□ 0.24
LDLRAP1-201ENST00000374338 CYP27C1Q4G0S4 372 aa16.53■□□□□ 0.24
LDLRAP1-201ENST00000374338 CACHD1Q5VU97 1274 aa16.53■□□□□ 0.24
LDLRAP1-201ENST00000374338 KIAA1614Q5VZ46 1190 aa16.53■□□□□ 0.24
LDLRAP1-201ENST00000374338 TPGS2Q68CL5 300 aa16.53■□□□□ 0.24
LDLRAP1-201ENST00000374338 TMEM215Q68D42 235 aa16.53■□□□□ 0.24
LDLRAP1-201ENST00000374338 C22orf39Q6P5X5 142 aa16.53■□□□□ 0.24
LDLRAP1-201ENST00000374338 DOK6Q6PKX4 331 aa16.53■□□□□ 0.24
LDLRAP1-201ENST00000374338 OR8J3Q8NGG0 315 aa16.53■□□□□ 0.24
LDLRAP1-201ENST00000374338 PCNPQ8WW12 178 aaKnown RBP16.53■□□□□ 0.24
LDLRAP1-201ENST00000374338 TRMT2BQ96GJ1 504 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms