RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 PCM1Q15154 2024 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 WASHC1A8K0Z3 465 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 H3BSH0 61 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 C7P10643 843 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 ELAVL3Q14576 367 aaKnown RBP16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 ZNF234Q14588 700 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 LIPKQ5VXJ0 399 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 WASH2PQ6VEQ5 465 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 CADM2Q8N3J6 435 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 ZNF689Q96CS4 500 aaPredicted RBP16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 RETREG1Q9H6L5 497 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 TIGARQ9NQ88 270 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 NUDT14O95848 222 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 TLX1P31314 330 aaPredicted RBP16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 NKX2-5P52952 324 aaPredicted RBP16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 LRRC26Q2I0M4 334 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 SNAP47Q5SQN1 464 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 BHLHB9Q6PI77 547 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 SLC38A4Q969I6 547 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 PRR14Q9BWN1 585 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 SLC27A6Q9Y2P4 619 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 SRP54P61011 504 aaKnown RBP16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 ZNF404Q494X3 552 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 TOR1AIP1Q5JTV8 583 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 UCK2Q9BZX2 261 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 RPS6KB2Q9UBS0 482 aa16.9■□□□□ 0.3
TRAF3IP1-201ENST00000373327 CA3P07451 260 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 BMP7P18075 431 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 ADARB1P78563 741 aaKnown RBP16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 PCDH1Q08174 1060 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 TMEM107Q6UX40 140 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 BCDIN3DQ7Z5W3 292 aaKnown RBP16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 CPXM2Q8N436 756 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 NXPE3Q969Y0 559 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 DPH7Q9BTV6 452 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 QRSL1Q9H0R6 528 aaKnown RBP16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 RSPH9Q9H1X1 276 aaPredicted RBP16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 SRMSQ9H3Y6 488 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 ANKRA2Q9H9E1 313 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 CYP17A1P05093 508 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 CPN2P22792 545 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 PRMT2P55345 433 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 MAP4K2Q12851 820 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 TMEM150AQ86TG1 271 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 DRAXINQ8NBI3 349 aaPredicted RBP16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 ARSGQ96EG1 525 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 RDH12Q96NR8 316 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 RAD9AQ99638 391 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 SPATA5L1Q9BVQ7 753 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 C1QTNF7Q9BXJ2 289 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 SLC2A11Q9BYW1 496 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 SLC28A3Q9HAS3 691 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 RLIMQ9NVW2 624 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 FGF19O95750 216 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 RGS1Q08116 209 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 ZNF630Q2M218 657 aaPredicted RBP16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 MPP7Q5T2T1 576 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 HSDL2Q6YN16 418 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 MRPL43Q8N983 215 aaKnown RBP16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 HERVK_113Q902F9 699 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 PHOX2BQ99453 314 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 ERVK13-1Q9NX77 482 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 NDRG2Q9UN36 371 aaKnown RBP16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 CA5BQ9Y2D0 317 aa16.89■□□□□ 0.29
TRAF3IP1-201ENST00000373327 C1orf105O95561 183 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 CSF2P04141 144 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 BMPR1AP36894 532 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 CRISP3P54108 245 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 SMIM11AP58511 58 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 C10orf62Q5T681 223 aaPredicted RBP16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 ALG1LQ6GMV1 187 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 GFM1Q96RP9 751 aaKnown RBP16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 OR10H1Q9Y4A9 318 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 N6AMT1Q9Y5N5 214 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 KLK8O60259 260 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 PSIP1O75475 530 aaKnown RBP16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 CDC123O75794 336 aaPredicted RBP16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 CCNKO75909 580 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 TYRP1P17643 537 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 IFNGR2P38484 337 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 DMPKQ09013 629 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 CBLBQ13191 982 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 TUBA3CQ13748 450 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 MAD2L1BPQ15013 274 aaPredicted RBP16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 NNATQ16517 81 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 ZNF311Q5JNZ3 666 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 LHFPL3Q86UP9 236 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 MSRB3Q8IXL7 192 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 TBC1D15Q8TC07 691 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 WFIKKN2Q8TEU8 576 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 RERGQ96A58 199 aaPredicted RBP16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 DMRT3Q9NQL9 472 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 ZNF624Q9P2J8 865 aaPredicted RBP16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 MKLN1Q9UL63 735 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 GSTK1Q9Y2Q3 226 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 ARID1AO14497 2285 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 SLC16A5O15375 505 aa16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 CAPN5O15484 640 aaPredicted RBP16.88■□□□□ 0.29
TRAF3IP1-201ENST00000373327 RPL4P36578 427 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms