RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 ACOT4Q8N9L9 421 aa17.62■□□□□ 0.41
TMEM53-201ENST00000372235 OR7G3Q8NG95 312 aa17.62■□□□□ 0.41
TMEM53-201ENST00000372235 NCLNQ969V3 563 aa17.62■□□□□ 0.41
TMEM53-201ENST00000372235 RGMAQ96B86 450 aa17.62■□□□□ 0.41
TMEM53-201ENST00000372235 ALOXE3Q9BYJ1 711 aa17.62■□□□□ 0.41
TMEM53-201ENST00000372235 ACTR8Q9H981 624 aa17.62■□□□□ 0.41
TMEM53-201ENST00000372235 TIMMDC1Q9NPL8 285 aa17.62■□□□□ 0.41
TMEM53-201ENST00000372235 PSD3Q9NYI0 1048 aa17.62■□□□□ 0.41
TMEM53-201ENST00000372235 PHF11Q9UIL8 331 aa17.62■□□□□ 0.41
TMEM53-201ENST00000372235 ENTPD4Q9Y227 616 aa17.62■□□□□ 0.41
TMEM53-201ENST00000372235 SPTBN1Q01082 2364 aaKnown RBP17.62■□□□□ 0.41
TMEM53-201ENST00000372235 ESYT3A0FGR9 886 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 NPIPA5E9PKD4 350 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 KIF2AO00139 706 aaPredicted RBP17.61■□□□□ 0.41
TMEM53-201ENST00000372235 ASNA1O43681 348 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 PRAMEF4O60810 478 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 TBX6O95947 436 aaPredicted RBP17.61■□□□□ 0.41
TMEM53-201ENST00000372235 INHBAP08476 426 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 RBP1P09455 135 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 EPORP19235 508 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 TNNI3P19429 210 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 CPN2P22792 545 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 PTX3P26022 381 aaPredicted RBP17.61■□□□□ 0.41
TMEM53-201ENST00000372235 PMP22Q01453 160 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 DLG1Q12959 904 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 PCBP2Q15366 365 aaKnown RBP eCLIP17.61■□□□□ 0.41
TMEM53-201ENST00000372235 TRADDQ15628 312 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 DEPDC1Q5TB30 811 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 PRAMEF9Q5VWM5 478 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 OR4C11Q6IEV9 310 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 Q6ZPB1 254 aaPredicted RBP17.61■□□□□ 0.41
TMEM53-201ENST00000372235 SPPL2CQ8IUH8 684 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 CYP4Z2PQ8N1L4 340 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 MMGT1Q8N4V1 131 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 TEX9Q8N6V9 391 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 KCTD4Q8WVF5 259 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 C16orf45Q96MC5 204 aaPredicted RBP17.61■□□□□ 0.41
TMEM53-201ENST00000372235 FUT8Q9BYC5 575 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 CHST11Q9NPF2 352 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 KCMF1Q9P0J7 381 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 COPS7AQ9UBW8 275 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 NPIPA1Q9UND3 350 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 ZNF835Q9Y2P0 537 aa17.61■□□□□ 0.41
TMEM53-201ENST00000372235 ZGRF1Q86YA3 2104 aa17.6■□□□□ 0.41
TMEM53-201ENST00000372235 A8MVJ9 347 aa17.6■□□□□ 0.41
TMEM53-201ENST00000372235 H0YIV9 168 aa17.6■□□□□ 0.41
TMEM53-201ENST00000372235 HNRNPRO43390 633 aaKnown RBP17.6■□□□□ 0.41
TMEM53-201ENST00000372235 KLK8O60259 260 aa17.6■□□□□ 0.41
TMEM53-201ENST00000372235 KRT38O76015 456 aa17.6■□□□□ 0.41
TMEM53-201ENST00000372235 TGFB1P01137 390 aa17.6■□□□□ 0.41
TMEM53-201ENST00000372235 MTHFD2P13995 350 aa17.6■□□□□ 0.41
TMEM53-201ENST00000372235 BUD31P41223 144 aaPredicted RBP17.6■□□□□ 0.41
TMEM53-201ENST00000372235 GPR143P51810 404 aa17.6■□□□□ 0.41
TMEM53-201ENST00000372235 PFKFB4Q16877 469 aa17.6■□□□□ 0.41
TMEM53-201ENST00000372235 TSNAXIP1Q2TAA8 658 aa17.6■□□□□ 0.41
TMEM53-201ENST00000372235 MYLK4Q86YV6 388 aaPredicted RBP17.6■□□□□ 0.41
TMEM53-201ENST00000372235 CENPLQ8N0S6 344 aaPredicted RBP17.6■□□□□ 0.41
TMEM53-201ENST00000372235 AMER2Q8N7J2 671 aa17.6■□□□□ 0.41
TMEM53-201ENST00000372235 TANKQ92844 425 aa17.6■□□□□ 0.41
TMEM53-201ENST00000372235 ART5Q96L15 291 aa17.6■□□□□ 0.41
TMEM53-201ENST00000372235 FMO2Q99518 471 aa17.6■□□□□ 0.41
TMEM53-201ENST00000372235 PELOQ9BRX2 385 aaKnown RBP17.6■□□□□ 0.41
TMEM53-201ENST00000372235 HES7Q9BYE0 225 aa17.6■□□□□ 0.41
TMEM53-201ENST00000372235 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.6■□□□□ 0.41
TMEM53-201ENST00000372235 HPF1Q9NWY4 346 aa17.6■□□□□ 0.41
TMEM53-201ENST00000372235 MYOTQ9UBF9 498 aa17.6■□□□□ 0.41
TMEM53-201ENST00000372235 ERVK-11Q9UQG0 969 aa17.6■□□□□ 0.41
TMEM53-201ENST00000372235 PRRG2O14669 202 aa17.59■□□□□ 0.41
TMEM53-201ENST00000372235 CTAGE8P0CG41 777 aa17.59■□□□□ 0.41
TMEM53-201ENST00000372235 COL6A2P12110 1019 aa17.59■□□□□ 0.41
TMEM53-201ENST00000372235 ABOP16442 354 aa17.59■□□□□ 0.41
TMEM53-201ENST00000372235 LGSNQ5TDP6 509 aa17.59■□□□□ 0.41
TMEM53-201ENST00000372235 ZNF468Q5VIY5 522 aaPredicted RBP17.59■□□□□ 0.41
TMEM53-201ENST00000372235 HIST2H2BCQ6DN03 193 aa17.59■□□□□ 0.41
TMEM53-201ENST00000372235 PAOXQ6QHF9 649 aa17.59■□□□□ 0.41
TMEM53-201ENST00000372235 RGS9BPQ6ZS82 235 aa17.59■□□□□ 0.41
TMEM53-201ENST00000372235 CLNKQ7Z7G1 428 aa17.59■□□□□ 0.41
TMEM53-201ENST00000372235 MRGPRGQ86SM5 289 aa17.59■□□□□ 0.41
TMEM53-201ENST00000372235 CTAGE4Q8IX94 777 aa17.59■□□□□ 0.41
TMEM53-201ENST00000372235 ZCCHC7Q8N3Z6 543 aaKnown RBP17.59■□□□□ 0.41
TMEM53-201ENST00000372235 HUS1BQ8NHY5 278 aa17.59■□□□□ 0.41
TMEM53-201ENST00000372235 ASB15Q8WXK1 588 aa17.59■□□□□ 0.41
TMEM53-201ENST00000372235 RBM18Q96H35 190 aaKnown RBP17.59■□□□□ 0.41
TMEM53-201ENST00000372235 CCDC120Q96HB5 630 aa17.59■□□□□ 0.41
TMEM53-201ENST00000372235 CSF3RQ99062 836 aa17.59■□□□□ 0.41
TMEM53-201ENST00000372235 CLDN16Q9Y5I7 305 aa17.59■□□□□ 0.41
TMEM53-201ENST00000372235 DOPEY1Q5JWR5 2465 aa17.59■□□□□ 0.41
TMEM53-201ENST00000372235 SPTAN1Q13813 2472 aaKnown RBP17.58■□□□□ 0.41
TMEM53-201ENST00000372235 PRSS44E7EML9 344 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 TFECO14948 347 aaPredicted RBP17.58■□□□□ 0.4
TMEM53-201ENST00000372235 HNRNPFP52597 415 aaKnown RBP17.58■□□□□ 0.4
TMEM53-201ENST00000372235 TBL3Q12788 808 aaKnown RBP17.58■□□□□ 0.4
TMEM53-201ENST00000372235 SLAMF1Q13291 335 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 CUL3Q13618 768 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 GTF2H2Q13888 395 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 ADNP2Q6IQ32 1131 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 GTF2H2CQ6P1K8 395 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 UBE3DQ7Z6J8 389 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 GPR180Q86V85 440 aa17.58■□□□□ 0.4
TMEM53-201ENST00000372235 SIAH3Q8IW03 269 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms