RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 ZNF136P52737 540 aa13.56□□□□□ -0.24
RAPGEF1-202ENST00000372190 ZNF155Q12901 538 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF1-202ENST00000372190 PUM1Q14671 1186 aaKnown RBP eCLIP13.56□□□□□ -0.24
RAPGEF1-202ENST00000372190 C4orf17Q53FE4 359 aa13.56□□□□□ -0.24
RAPGEF1-202ENST00000372190 ACSBG2Q5FVE4 666 aa13.56□□□□□ -0.24
RAPGEF1-202ENST00000372190 GPR153Q6NV75 609 aa13.56□□□□□ -0.24
RAPGEF1-202ENST00000372190 TWIST2Q8WVJ9 160 aa13.56□□□□□ -0.24
RAPGEF1-202ENST00000372190 A0A0J9YVX5 310 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 EDNRAP25101 427 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 LY6G5CQ5SRR4 150 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 NOXA1Q86UR1 476 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 ST7LQ8TDW4 575 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 LMX1AQ8TE12 382 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 PAPOLGQ9BWT3 736 aaKnown RBP13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 SLC2A4RGQ9NR83 387 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 OSER1Q9NX31 292 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 FLRT1Q9NZU1 646 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 SALL4Q9UJQ4 1053 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 GNAZP19086 355 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 SEMG2Q02383 582 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 RELAQ04206 551 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 CHAF1BQ13112 559 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 LAPTM5Q13571 262 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 FBXL22Q6P050 247 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 Q6ZVU0 165 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 AMZ2Q86W34 360 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 NKD2Q969F2 451 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 PLEKHA3Q9HB20 300 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 SCAF4O95104 1147 aaKnown RBP13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 CD48P09326 243 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 SLC35G6P0C7Q6 338 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 PCSK2P16519 638 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 ACVR2AP27037 513 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 CTSOP43234 321 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 KIR3DL1P43629 444 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 OR12D2P58182 307 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 ADAMTS15Q8TE58 950 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 NCSTNQ92542 709 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 CYP2S1Q96SQ9 504 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 TCAF1Q9Y4C2 921 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 POMT1Q9Y6A1 747 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 PIGBOS1A0A0B4J2F0 54 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 CXCR6O00574 342 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 EIF1AYO14602 144 aaKnown RBP13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 SLC22A2O15244 555 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 SNRNP70P08621 437 aaKnown RBP13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 ENDOUP21128 410 aaKnown RBP13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 CDKN2BP42772 138 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 EIF1AXP47813 144 aaKnown RBP13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 ACTA2P62736 377 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 ACTG2P63267 376 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 ACTC1P68032 377 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 ACTA1P68133 377 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 HEPACAMQ14CZ8 416 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 ZNF101Q8IZC7 436 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 SDHAF2Q9NX18 166 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 FKBPLQ9UIM3 349 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 CLCA3PQ9Y6N3 262 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 M0R2N6 131 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 TAS2R50P59544 299 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 PPM1JQ5JR12 505 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 SUMF2Q8NBJ7 301 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 PRICKLE1Q96MT3 831 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 CDCA3Q99618 268 aaPredicted RBP13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 POTEKPQ9BYX7 375 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 GPR62Q9BZJ7 368 aa13.55□□□□□ -0.24
RAPGEF1-202ENST00000372190 GRIN2DO15399 1336 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 AQP12BA6NM10 295 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 hCG_2039718K7EN88 272 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 DNAJB5O75953 348 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 GSG1LQ6UXU4 331 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 AQP12AQ8IXF9 295 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 OR2AJ1Q8NGZ0 328 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 PTERQ96BW5 349 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 ZNF599Q96NL3 588 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 SGIP1Q9BQI5 828 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 BRINP2Q9C0B6 783 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 EXTL2Q9UBQ6 330 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 A0A1B0GVI7 797 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 OTOL1A6NHN0 477 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 E7ESA3 106 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 STK17BO94768 372 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 GOT2P00505 430 aaKnown RBP13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 TFPIP10646 304 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 EN2P19622 333 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 ITPKBP27987 946 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 VAMP3Q15836 100 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 RALGPS1Q5JS13 557 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 BRAT1Q6PJG6 821 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 GPR149Q86SP6 731 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 LENG8Q96PV6 779 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 OSBPL2Q9H1P3 480 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 C8orf33Q9H7E9 229 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 CYTIPO60759 359 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 TOX4O94842 621 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 HMGN1P05114 100 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 POU2F1P14859 743 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 UBE2UQ5VVX9 321 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 TPRG1Q6ZUI0 275 aa13.54□□□□□ -0.24
RAPGEF1-202ENST00000372190 KANSL1Q7Z3B3 1105 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms