RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CDK5R2Q13319 367 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 FGL2Q14314 439 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 C16orf72Q14CZ0 275 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 MEP1AQ16819 746 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 PROX2Q3B8N5 592 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 IQCCQ4KMZ1 466 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 COX20Q5RI15 118 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 SAXO2Q658L1 398 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 DHRS4L2Q6PKH6 230 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 SPARTQ8N0X7 666 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 C2orf73Q8N5S3 287 aaPredicted RBP13.34□□□□□ -0.27
USF1-202ENST00000368020 NFKBIDQ8NI38 313 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 PSMA8Q8TAA3 256 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 GIPC3Q8TF64 312 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 PDXPQ96GD0 296 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 F2RL3Q96RI0 385 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 NODALQ96S42 347 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 PSD2Q9BQI7 771 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 APOOQ9BUR5 198 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 SARGQ9BW04 601 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 EPS8L2Q9H6S3 715 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 MRPS30Q9NP92 439 aaKnown RBP13.34□□□□□ -0.27
USF1-202ENST00000368020 IMP3Q9NV31 184 aaKnown RBP13.34□□□□□ -0.27
USF1-202ENST00000368020 NDUFAF4Q9P032 175 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 FAM32AQ9Y421 112 aaKnown RBP13.34□□□□□ -0.27
USF1-202ENST00000368020 PCDHGA2Q9Y5H1 932 aa13.34□□□□□ -0.27
USF1-202ENST00000368020 KRBA1A5PL33 1030 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 ARRDC5A6NEK1 342 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 TRIM64BA6NI03 449 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 C5orf58C9J3I9 102 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 TNFRSF11BO00300 401 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 CHRNB1P11230 501 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 IL7RP16871 459 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 RRM2P31350 389 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 IGFALSP35858 605 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 CRYBA2P53672 197 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 SEC13P55735 322 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 MVKQ03426 396 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 KCNC4Q03721 635 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 PPP1R8Q12972 351 aaKnown RBP13.33□□□□□ -0.27
USF1-202ENST00000368020 RAPSNQ13702 412 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 LRRC32Q14392 662 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 OR4C11Q6IEV9 310 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 FAM92BQ6ZTR7 304 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 GALNT10Q86SR1 603 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 SVOPQ8N4V2 548 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 LINC01555Q8NAE3 123 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 IPCEF1Q8WWN9 437 aaPredicted RBP13.33□□□□□ -0.27
USF1-202ENST00000368020 ZNF300Q96RE9 604 aaPredicted RBP13.33□□□□□ -0.27
USF1-202ENST00000368020 KIR3DX1Q9H7L2 352 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 FANCEQ9HB96 536 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 CA14Q9ULX7 337 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 POFUT2Q9Y2G5 429 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 WDR37Q9Y2I8 494 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 MAP4K5Q9Y4K4 846 aa13.33□□□□□ -0.27
USF1-202ENST00000368020 TRIOO75962 3097 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 TTC28Q96AY4 2481 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 DOCK9Q9BZ29 2069 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 TBC1D3DA0A087WVF3 549 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 TBC1D3IA0A087WXS9 549 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 TBC1D3EA0A087X179 549 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 TBC1D3KA0A087X1G2 549 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 TBC1D3FA6NER0 549 aaPredicted RBP13.33□□□□□ -0.28
USF1-202ENST00000368020 ANTXRLA6NF34 631 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 PDZK1P1A8MUH7 402 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 TBC1D3LB9A6J9 549 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 GCM2O75603 506 aaPredicted RBP13.33□□□□□ -0.28
USF1-202ENST00000368020 TBX6O95947 436 aaPredicted RBP13.33□□□□□ -0.28
USF1-202ENST00000368020 C1QCP02747 245 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 TBC1D3HP0C7X1 549 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 HOXB2P14652 356 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 CD72P21854 359 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 PCSK6P29122 969 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 AQP1P29972 269 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 CMPK1P30085 196 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 SSR2P43308 183 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 PCBP4P57723 403 aaKnown RBP13.33□□□□□ -0.28
USF1-202ENST00000368020 CYP4F2P78329 520 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 TEKQ02763 1124 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 TGM3Q08188 693 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 NPRL3Q12980 569 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 CTU2Q2VPK5 515 aaKnown RBP13.33□□□□□ -0.28
USF1-202ENST00000368020 EOGTQ5NDL2 527 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 GPR107Q5VW38 600 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 TBC1D3GQ6DHY5 549 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 XAF1Q6GPH4 301 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 TBC1D3CQ6IPX1 549 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 BHLHB9Q6PI77 547 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 WASH2PQ6VEQ5 465 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 ADCK2Q7Z695 626 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 GALNT5Q7Z7M9 940 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 TBC1D3Q8IZP1 549 aaPredicted RBP13.33□□□□□ -0.28
USF1-202ENST00000368020 LMNTD1Q8N9Z9 388 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 OR2A1Q8NGT9 310 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 TAMM41Q96BW9 452 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 HRASLS5Q96KN8 279 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 OR2M4Q96R27 311 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 MKRN2Q9H000 416 aaKnown RBP13.33□□□□□ -0.28
USF1-202ENST00000368020 ZNF556Q9HAH1 456 aa13.33□□□□□ -0.28
USF1-202ENST00000368020 LTB4R2Q9NPC1 389 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 375.4 ms