RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 IRF4Q15306 451 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 LGI4Q8N135 537 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 CLEC1AQ8NC01 280 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 RAB2BQ8WUD1 216 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 ZNF707Q96C28 371 aaPredicted RBP6.74□□□□□ -1.33
RAB5B-201ENST00000360299 RHBDF1Q96CC6 855 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 DTD2Q96FN9 168 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 CRELD1Q96HD1 420 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 NSUN5Q96P11 429 aaKnown RBP6.74□□□□□ -1.33
RAB5B-201ENST00000360299 KCNS3Q9BQ31 491 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 KCNN2Q9H2S1 579 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 NOL6Q9H6R4 1146 aaKnown RBP6.74□□□□□ -1.33
RAB5B-201ENST00000360299 ZC4H2Q9NQZ6 224 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 SDHAF3Q9NRP4 125 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 SERINC1Q9NRX5 453 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 EHD3Q9NZN3 535 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 TMEM5Q9Y2B1 443 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 SPAARA0A1B0GVQ0 90 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 MROH6A6NGR9 719 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 HAT1O14929 419 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 SMAD6O43541 496 aaKnown RBP6.74□□□□□ -1.33
RAB5B-201ENST00000360299 RPS17P08708 135 aaKnown RBP6.74□□□□□ -1.33
RAB5B-201ENST00000360299 HSD17B1P14061 328 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 EFNA1P20827 205 aaPredicted RBP6.74□□□□□ -1.33
RAB5B-201ENST00000360299 ARF5P84085 180 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 DECR1Q16698 335 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 TBC1D25Q3MII6 688 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 IQCCQ4KMZ1 466 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 CRB2Q5IJ48 1285 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 TCEAL6Q6IPX3 200 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 LIPIQ6XZB0 460 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 PARS2Q7L3T8 475 aaKnown RBP6.74□□□□□ -1.33
RAB5B-201ENST00000360299 OR6C4Q8NGE1 309 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 OR2I1PQ8NGU4 316 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 IFI44Q8TCB0 444 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 TCEAL3Q969E4 200 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 BORCS5Q969J3 196 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 C1GALT1C1Q96EU7 318 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 ZNF570Q96NI8 536 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 IER2Q9BTL4 223 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 CXorf21Q9HAI6 301 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 TOR4AQ9NXH8 423 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 TUBA8Q9NY65 449 aaPredicted RBP6.74□□□□□ -1.33
RAB5B-201ENST00000360299 CLEC1BQ9P126 229 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 AP1M2Q9Y6Q5 423 aa6.74□□□□□ -1.33
RAB5B-201ENST00000360299 F5P12259 2224 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 LCTP09848 1927 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 A0A0G2JN53 185 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 TTLL8A6PVC2 850 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 REM1O75628 298 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 PLGP00747 810 aaPredicted RBP6.73□□□□□ -1.33
RAB5B-201ENST00000360299 NR2C1P13056 603 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 CD9P21926 228 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 AK4P27144 223 aaPredicted RBP6.73□□□□□ -1.33
RAB5B-201ENST00000360299 NUP62P37198 522 aaPredicted RBP6.73□□□□□ -1.33
RAB5B-201ENST00000360299 VSX2P58304 361 aaPredicted RBP6.73□□□□□ -1.33
RAB5B-201ENST00000360299 SH3BP2P78314 561 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 RAPSNQ13702 412 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 HLA-BQ31612 363 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 KCT2Q8NC54 265 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 ATP6V1C2Q8NEY4 427 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 MDGA1Q8NFP4 955 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 MCFD2Q8NI22 146 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 TMBIM1Q969X1 311 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 NTMT1Q9BV86 223 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 TBL1XR1Q9BZK7 514 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 SDR39U1Q9NRG7 319 aaPredicted RBP6.73□□□□□ -1.33
RAB5B-201ENST00000360299 CCM2LQ9NUG4 571 aaPredicted RBP6.73□□□□□ -1.33
RAB5B-201ENST00000360299 LHX3Q9UBR4 397 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 LRRC42Q9Y546 428 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 WDR81Q562E7 1941 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 C17orf113A0A1B0GUU1 675 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 SAGE2PA6NJ88 616 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 ARHGAP33O14559 1287 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 NADKO95544 446 aaPredicted RBP6.73□□□□□ -1.33
RAB5B-201ENST00000360299 ECDO95905 644 aaPredicted RBP6.73□□□□□ -1.33
RAB5B-201ENST00000360299 JUNP05412 331 aaKnown RBP6.73□□□□□ -1.33
RAB5B-201ENST00000360299 ATXN1LP0C7T5 689 aaKnown RBP6.73□□□□□ -1.33
RAB5B-201ENST00000360299 HMGA1P17096 107 aaKnown RBP6.73□□□□□ -1.33
RAB5B-201ENST00000360299 MATN1P21941 496 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 RAB8AP61006 207 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 RCAN2Q14206 197 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 ZSWIM7Q19AV6 140 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 CTC1Q2NKJ3 1217 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 VMACQ2NL98 169 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 CEP78Q5JTW2 689 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 NADSYN1Q6IA69 706 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 NUP54Q7Z3B4 507 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 P2RY8Q86VZ1 359 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 OR13J1Q8NGT2 312 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 KCNE4Q8WWG9 221 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 RELTQ969Z4 430 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 COPS4Q9BT78 406 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 LRFN3Q9BTN0 628 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 TWSG1Q9GZX9 223 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 MGAT4BQ9UQ53 548 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 HYKKA2RU49 373 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 FLRT2O43155 660 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 B4GALT2O60909 372 aa6.73□□□□□ -1.33
RAB5B-201ENST00000360299 TRIM3O75382 744 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms