RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 CCL11P51671 97 aa18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 HSD17B7P56937 341 aa18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 BTG2P78543 158 aa18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 RHAGQ02094 409 aa18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 NR6A1Q15406 480 aa18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 KIRREL2Q6UWL6 708 aa18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 LANCL3Q6ZV70 420 aa18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 CPEB2Q7Z5Q1 589 aaKnown RBP18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 SHISA5Q8N114 240 aa18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 PLPP5Q8NEB5 264 aa18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 OR11G2Q8NGC1 345 aa18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 CDC26Q8NHZ8 85 aa18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 TSLPQ969D9 159 aa18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 ZNF160Q9HCG1 818 aa18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 ATP13A2Q9NQ11 1180 aa18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 RIC8BQ9NVN3 520 aa18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 ZNF446Q9NWS9 450 aa18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 RAP2CQ9Y3L5 183 aa18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 KCNMB2Q9Y691 235 aa18.03■□□□□ 0.48
HLA-DRB1-201ENST00000360004 A6NL46 340 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 ITM2AO43736 263 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 TMPRSS11DO60235 418 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 SEC22BO75396 215 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 RSL1D1O76021 490 aaKnown RBP18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 IFNA16P05015 189 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 FGF4P08620 206 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 ITGA3P26006 1051 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 PPP2R1BP30154 601 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 TNFRSF17Q02223 184 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 BST1Q10588 318 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 SFT2D3Q587I9 215 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 DCAF10Q5QP82 559 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 CPZQ66K79 652 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 NDUFAF7Q7L592 441 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 ANKRD37Q7Z713 158 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 RAB3IL1Q8TBN0 382 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 FAIM2Q9BWQ8 316 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 RPF2Q9H7B2 306 aaKnown RBP18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 MANSC1Q9H8J5 431 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 ZDHHC2Q9UIJ5 367 aa18.02■□□□□ 0.48
HLA-DRB1-201ENST00000360004 SERTM1A2A2V5 107 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 SYNDIG1LA6NDD5 238 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 MKRN2OSH3BPM6 223 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 PIP5K1BO14986 540 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 SEC24DO94855 1032 aaPredicted RBP18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 HPP00738 406 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 TPP2P29144 1249 aaPredicted RBP18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 HNRNPH2P55795 449 aaKnown RBP18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 POLE2P56282 527 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 TBL3Q12788 808 aaKnown RBP18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 TMEM205Q6UW68 189 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 TRIM46Q7Z4K8 759 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 PARP9Q8IXQ6 854 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 OR6Y1Q8NGX8 325 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 LRRC8CQ8TDW0 803 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 CHTF18Q8WVB6 975 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 APIPQ96GX9 242 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 LPAR4Q99677 370 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 EBPLQ9BY08 206 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 ZNF717Q9BY31 904 aaPredicted RBP18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 LRTM1Q9HBL6 345 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 PNO1Q9NRX1 252 aaKnown RBP18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 INTS9Q9NV88 658 aaKnown RBP18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 KCMF1Q9P0J7 381 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 MCM8Q9UJA3 840 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 ATG4BQ9Y4P1 393 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 DNAJC15Q9Y5T4 150 aa18.01■□□□□ 0.47
HLA-DRB1-201ENST00000360004 DSPP15924 2871 aaKnown RBP18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 IGHV3-20A0A0C4DH32 117 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 A8MUA0 341 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 ERVH48-1M5A8F1 160 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 CYR61O00622 381 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 CTNSO60931 367 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 ANXA4P09525 319 aaPredicted RBP18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 TNNI3P19429 210 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 NR1D1P20393 614 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 TIA1P31483 386 aaKnown RBP eCLIP18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 ALDH9A1P49189 494 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 RPL14P50914 215 aaKnown RBP18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 AP2B1P63010 937 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 AIMP2Q13155 320 aaKnown RBP18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 PDCD2Q16342 344 aaPredicted RBP18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 GALNTL6Q49A17 601 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 C18orf63Q68DL7 685 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 PAPD4Q6PIY7 484 aaKnown RBP18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 APLFQ8IW19 511 aaPredicted RBP18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 ZNF781Q8N8C0 355 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 TMEM52Q8NDY8 209 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 C7orf57Q8NEG2 295 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 TANKQ92844 425 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 UBL7Q96S82 380 aaPredicted RBP18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 TUBB6Q9BUF5 446 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 ZNF395Q9H8N7 513 aaPredicted RBP18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 NECTIN3Q9NQS3 549 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 THAP1Q9NVV9 213 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 C1orf109Q9NX04 203 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 PTGDR2Q9Y5Y4 395 aa18■□□□□ 0.47
HLA-DRB1-201ENST00000360004 IGHV1-45A0A0A0MS14 117 aa17.99■□□□□ 0.47
HLA-DRB1-201ENST00000360004 GLOD5A6NK44 160 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms