RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 GLTPQ9NZD2 209 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 TVP23AA6NH52 213 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 WNT9AO14904 365 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 F7P08709 466 aaPredicted RBP8.45□□□□□ -1.06
COL6A6-201ENST00000358511 EBLN1P0CF75 366 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 CKMT1AP12532 417 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 CYCSP99999 105 aaKnown RBP8.45□□□□□ -1.06
COL6A6-201ENST00000358511 CACUL1Q86Y37 369 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 MCEMP1Q8IX19 187 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF527Q8NB42 609 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 TERB2Q8NHR7 220 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 GPR151Q8TDV0 419 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 ADAMTS19Q8TE59 1207 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 CASTOR1Q8WTX7 329 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 OR5B12Q96R08 314 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 EPYCQ99645 322 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 EFCAB11Q9BUY7 163 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 ASAH2Q9NR71 780 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 GALPQ9UBC7 116 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 PIGBOS1A0A0B4J2F0 54 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 MDFIC2A0A1B0GVS7 189 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 E7EQ34 232 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 SULT1C2O00338 296 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 GOSR2O14653 212 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 GRM6O15303 877 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 NUPL2O15504 423 aaKnown RBP8.45□□□□□ -1.06
COL6A6-201ENST00000358511 PI15O43692 258 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 DHRS4L1P0CG22 281 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 ITGAMP11215 1152 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 NT5EP21589 574 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 OR1E2P47887 323 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 CRYBB1P53674 252 aaPredicted RBP8.45□□□□□ -1.06
COL6A6-201ENST00000358511 SMAD3P84022 425 aaKnown RBP8.45□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF763Q0D2J5 394 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 TECRLQ5HYJ1 363 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF648Q5T619 568 aaPredicted RBP8.45□□□□□ -1.06
COL6A6-201ENST00000358511 OR56A1Q8NGH5 318 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 TMEM45AQ9NWC5 275 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 SOX30O94993 753 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 GJB1P08034 283 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 HSD17B2P37059 387 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 EVX2Q03828 476 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 MAPK14Q16539 360 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 STEAP4Q687X5 459 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 CDHR3Q6ZTQ4 885 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 CEP68Q76N32 757 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 SLC22A17Q8WUG5 538 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 AKT1S1Q96B36 256 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 OR51I1Q9H343 314 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 KIF26BQ2KJY2 2108 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 BRWD1Q9NSI6 2320 aa8.45□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF878C9JN71 531 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 SLC35E2BP0CK96 405 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 CERS1P27544 350 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 CORO1AP31146 461 aaKnown RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 HOXD13P35453 343 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 CAPZA1P52907 286 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 LILRA4P59901 499 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 MS4A2Q01362 244 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 ESCO2Q56NI9 601 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 Q6ZNX1 250 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 RBM18Q96H35 190 aaKnown RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 TXNDC15Q96J42 360 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 RIPOR3Q96MK2 946 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 ACOT13Q9NPJ3 140 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 ZFR2Q9UPR6 939 aaKnown RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 MYO7AQ13402 2215 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 SCN3AQ9NY46 2000 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 TEX13DA0A0J9YY54 714 aaPredicted RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 NAP1L6A6NFF2 107 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 ATP6V1G2-DDX39BF2Z307 99 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 CACNB4O00305 520 aaPredicted RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 B4GAT1O43505 415 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 SULT1B1O43704 296 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 TACR2P21452 398 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 CRHBPP24387 322 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 CASP3P42574 277 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 FCGRTP55899 365 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 PAFAH1B3Q15102 231 aaKnown RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 GPR33Q49SQ1 333 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 DNM1P34Q6PK57 102 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 OR52E4Q8NGH9 312 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 GRHL3Q8TE85 626 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 PLD4Q96BZ4 506 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 SECISBP2Q96T21 854 aaKnown RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 ARHGEF17Q96PE2 2063 aaPredicted RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 SNRNP200O75643 2136 aaKnown RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 H7C417 338 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 WNT10BO00744 389 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 HSPA12AO43301 675 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 RXRBP28702 533 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 POU4F3Q15319 338 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 TAC4Q86UU9 113 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 ZNF599Q96NL3 588 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 FN3KQ9H479 309 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 SORBS2O94875 1100 aaKnown RBP8.44□□□□□ -1.06
COL6A6-201ENST00000358511 CDK1P06493 297 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 SOX3P41225 446 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 MAGEA11P43364 429 aa8.44□□□□□ -1.06
COL6A6-201ENST00000358511 CYS1Q717R9 158 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms