RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 TMEM151AQ8N4L1 468 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 OR52B6Q8NGF0 335 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 SUN3Q8TAQ9 357 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 FMO2Q99518 471 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 SH3BGRL2Q9UJC5 107 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 PCDHGB6Q9Y5F9 930 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 PCNX1Q96RV3 2341 aa15.58■□□□□ 0.08
PDLIM7-201ENST00000355572 HRKO00198 91 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 PPP6CO00743 305 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 CTNSO60931 367 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 EEDO75530 441 aaKnown RBP15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 SLC25A12O75746 678 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 FAM153BP0C7A2 387 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 GFAPP14136 432 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 EPB42P16452 691 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 HIST1H1TP22492 207 aaPredicted RBP15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 TRHRP34981 398 aaPredicted RBP15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 DCTP40126 519 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 RFC3P40938 356 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 ALDH18A1P54886 795 aaKnown RBP15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 TAS2R50P59544 299 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 GTF2H2Q13888 395 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 CDSNQ15517 529 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 ZRSR2Q15696 482 aaKnown RBP15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 MAPKAPK3Q16644 382 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 FAM83EQ2M2I3 478 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 FAM153CQ494X1 144 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 PAGE2BQ5JRK9 111 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 DEPDC1Q5TB30 811 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 GTF2H2CQ6P1K8 395 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 PTGR2Q8N8N7 351 aaPredicted RBP15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 DNAJB8Q8NHS0 232 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 WDR20Q8TBZ3 569 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 KCNC2Q96PR1 638 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 TBCDQ9BTW9 1192 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 ALOXE3Q9BYJ1 711 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 DEFB126Q9BYW3 111 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 COPS7BQ9H9Q2 264 aaPredicted RBP15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 ADAP2Q9NPF8 381 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 DEPPQ9NTK1 212 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 XPR1Q9UBH6 696 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 SEC14L3Q9UDX4 400 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 NFU1Q9UMS0 254 aa15.57■□□□□ 0.08
PDLIM7-201ENST00000355572 A0A0G2JMM0 328 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 A0A1W2PPB8 328 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 A0A1W2PRS3 328 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 PINLYPA6NC86 204 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 KIR3DP1A8MWS1 328 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 TRIM49D1C9J1S8 452 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 TMPRSS11DO60235 418 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 ITGA10O75578 1167 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 CRYABP02511 175 aaKnown RBP15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 CTAGE8P0CG41 777 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 EEF1DP29692 281 aaKnown RBP15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 PHBP35232 272 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 BSGP35613 385 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 SSR2P43308 183 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 HLCSP50747 726 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 CLCN2P51788 898 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 TRAF3Q13114 568 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 TERF2Q15554 542 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 C3AR1Q16581 482 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 CPSF6Q16630 551 aaKnown RBP eCLIP15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 HIST2H2ACQ16777 129 aaPredicted RBP15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 HIST2H2AA3Q6FI13 130 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 MYLK4Q86YV6 388 aaPredicted RBP15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 CTAGE4Q8IX94 777 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 GSPT2Q8IYD1 628 aaKnown RBP15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 RELTQ969Z4 430 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 PHF21BQ96EK2 531 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 VMP1Q96GC9 406 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 GPR137Q96N19 417 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 EPB41L4BQ9H329 900 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 IPPKQ9H8X2 491 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 LYRM4Q9HD34 91 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 VTI1BQ9UEU0 232 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 MTRF1LQ9UGC7 380 aaKnown RBP15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 TINAGQ9UJW2 476 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 ATG4BQ9Y4P1 393 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 ZNF407Q9C0G0 2248 aa15.56■□□□□ 0.08
PDLIM7-201ENST00000355572 ARHGAP10A1A4S6 786 aa15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 NPIPA5E9PKD4 350 aa15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 GBAP04062 536 aa15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 CD46P15529 392 aa15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 TSPAN8P19075 237 aa15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 GRNP28799 593 aaKnown RBP15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 GPR85P60893 370 aa15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 IGLV3-21P80748 117 aaPredicted RBP15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 ADORA2A-AS1P86434 159 aa15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 SLAMF1Q13291 335 aa15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 ELAVL1Q15717 326 aaKnown RBP15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 OR4C11Q6IEV9 310 aa15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 MRM1Q6IN84 353 aaKnown RBP15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 SULF2Q8IWU5 870 aa15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 L3MBTL4Q8NA19 623 aa15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 ARMC2Q8NEN0 867 aa15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 ZNF721Q8TF20 911 aa15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 PPWD1Q96BP3 646 aaKnown RBP15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 MTFMTQ96DP5 389 aaKnown RBP15.55■□□□□ 0.08
PDLIM7-201ENST00000355572 CMTM7Q96FZ5 175 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms