RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 WDR36Q8NI36 951 aaKnown RBP18.65■□□□□ 0.58
COL13A1-201ENST00000354547 UCN3Q969E3 161 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 CXorf40BQ96DE9 158 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 MYNNQ9NPC7 610 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 CUEDC1Q9NWM3 386 aaPredicted RBP18.65■□□□□ 0.58
COL13A1-201ENST00000354547 SCHIP1Q9P0W5 487 aaPredicted RBP18.65■□□□□ 0.58
COL13A1-201ENST00000354547 IFT52Q9Y366 437 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 PLXNA2O75051 1894 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 WASHC1A8K0Z3 465 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 PRRT4C9JH25 899 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 DPM1O60762 260 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 LILRB5O75023 590 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 SLC6A11P48066 632 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 MNX1P50219 401 aaPredicted RBP18.65■□□□□ 0.58
COL13A1-201ENST00000354547 RBBP4Q09028 425 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 ARHGEF6Q15052 776 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 STEAP3Q658P3 488 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 WASH2PQ6VEQ5 465 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 SPRED2Q7Z698 418 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 NLRP8Q86W28 1048 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 AMER2Q8N7J2 671 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 TMEM38AQ9H6F2 299 aa18.65■□□□□ 0.58
COL13A1-201ENST00000354547 E9PQ18 207 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 H3BN98 237 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 ZW10O43264 779 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 AQP9O43315 295 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 MRPS14O60783 128 aaKnown RBP18.64■□□□□ 0.57
COL13A1-201ENST00000354547 KRT75O95678 551 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 IFNA14P01570 189 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 ARAFP10398 606 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 SERPINB1P30740 379 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 S100A5P33763 92 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 MAPK12P53778 367 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 PDE7AQ13946 482 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 DOC2BQ14184 412 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 DEPDC1Q5TB30 811 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 ARMC8Q8IUR7 673 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 CELF5Q8N6W0 485 aaKnown RBP18.64■□□□□ 0.57
COL13A1-201ENST00000354547 PLA2G15Q8NCC3 412 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 COQ10AQ96MF6 247 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 TOX2Q96NM4 488 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 CDADC1Q9BWV3 514 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 ZDHHC5Q9C0B5 715 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 MMP27Q9H306 513 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 RERGLQ9H628 205 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 PLCXD1Q9NUJ7 323 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 GIN1Q9NXP7 522 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 DNAJC27Q9NZQ0 273 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 RBMX2Q9Y388 322 aaKnown RBP18.64■□□□□ 0.57
COL13A1-201ENST00000354547 TSPAN11A1L157 253 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 AGAP5A6NIR3 686 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 FFAR1O14842 300 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 CEBPBP17676 345 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 GABRB1P18505 474 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 LYSMD2Q8IV50 215 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 SLC38A5Q8WUX1 472 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 WFDC6Q9BQY6 131 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 THSD1Q9NS62 852 aa18.64■□□□□ 0.57
COL13A1-201ENST00000354547 RANBP2P49792 3224 aaKnown RBP18.64■□□□□ 0.57
COL13A1-201ENST00000354547 CXorf51AA0A1B0GTR3 108 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 TRIM43BA6NCK2 446 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 AGRPO00253 132 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 PLPP1O14494 284 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 CYP17A1P05093 508 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 TUBA1BP68363 451 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 CRB2Q5IJ48 1285 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 TUBA1AQ71U36 451 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 DENND6BQ8NEG7 585 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 ZCCHC2Q9C0B9 1178 aaKnown RBP18.63■□□□□ 0.57
COL13A1-201ENST00000354547 CTPS2Q9NRF8 586 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 DKK3Q9UBP4 350 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 A8MU76 341 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 H7BY64 318 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 OR10H3O60404 316 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 UPK1BO75841 260 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 RECKO95980 971 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 PTX3P26022 381 aaPredicted RBP18.63■□□□□ 0.57
COL13A1-201ENST00000354547 TPTEP56180 551 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 REEP3Q6NUK4 255 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 ADCK2Q7Z695 626 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 C11orf74Q86VG3 221 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 LRRC56Q8IYG6 542 aaPredicted RBP18.63■□□□□ 0.57
COL13A1-201ENST00000354547 ADGRF3Q8IZF5 1079 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 CYP4Z2PQ8N1L4 340 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 TRIM43Q96BQ3 446 aaPredicted RBP18.63■□□□□ 0.57
COL13A1-201ENST00000354547 TMEM19Q96HH6 336 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 PRAP1Q96NZ9 151 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 MGLLQ99685 303 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 FAM83CQ9BQN1 747 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 KIAA0513O60268 411 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 CHRM5P08912 532 aaPredicted RBP18.63■□□□□ 0.57
COL13A1-201ENST00000354547 ADH5P11766 374 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 CRISP1P54107 249 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 SFSWAPQ12872 951 aaKnown RBP18.63■□□□□ 0.57
COL13A1-201ENST00000354547 FRMPD2BQ6IN97 320 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 WDR53Q7Z5U6 358 aaPredicted RBP18.63■□□□□ 0.57
COL13A1-201ENST00000354547 SLC9B2Q86UD5 537 aa18.63■□□□□ 0.57
COL13A1-201ENST00000354547 MMAAQ8IVH4 418 aaKnown RBP18.63■□□□□ 0.57
COL13A1-201ENST00000354547 RSPO3Q9BXY4 272 aaPredicted RBP18.63■□□□□ 0.57
COL13A1-201ENST00000354547 SLC23A2Q9UGH3 650 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms