RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 LMX1AQ8TE12 382 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 ASB12Q8WXK4 309 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 CXorf40BQ96DE9 158 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 APIPQ96GX9 242 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 ITCHQ96J02 903 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 SPRY4Q9C004 299 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 PAIP1Q9H074 479 aaKnown RBP7.83□□□□□ -1.16
CD44-205ENST00000352818 SEMA6CQ9H3T2 930 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 LRRN3Q9H3W5 708 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 RMI1Q9H9A7 625 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 FAM120CQ9NX05 1096 aaKnown RBP7.83□□□□□ -1.16
CD44-205ENST00000352818 LUZP4Q9P127 313 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 VPS29Q9UBQ0 182 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 ZNHIT2Q9UHR6 403 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 RUVBL1Q9Y265 456 aaKnown RBP7.83□□□□□ -1.16
CD44-205ENST00000352818 DLGAP4Q9Y2H0 992 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 DYRK1BQ9Y463 629 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 PCDHGA3Q9Y5H0 932 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 GMEB1Q9Y692 573 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 KCNE2Q9Y6J6 123 aa7.83□□□□□ -1.16
CD44-205ENST00000352818 SPTY2D1-AS1A0A0U1RR47 76 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 POM121BA6NF01 834 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 IGLON5A6NGN9 336 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 A6NHS1 94 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 FAM220BPB1ANY3 271 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 MKRN2OSH3BPM6 223 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 RAD1O60671 282 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 KCNJ13O60928 360 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 RNGTTO60942 597 aaKnown RBP7.82□□□□□ -1.16
CD44-205ENST00000352818 SMNDC1O75940 238 aaKnown RBP eCLIP7.82□□□□□ -1.16
CD44-205ENST00000352818 C1GALT1C1LP0DN25 315 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 MYCLP1P12525 358 aaPredicted RBP7.82□□□□□ -1.16
CD44-205ENST00000352818 IL1RNP18510 177 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 GGT1P19440 569 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 IL10P22301 178 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 HRH2P25021 359 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 PTPN6P29350 595 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 SERPINB1P30740 379 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 PIK3CBP42338 1070 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 TRPC1P48995 793 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 RPS21P63220 83 aaKnown RBP7.82□□□□□ -1.16
CD44-205ENST00000352818 YBX1P67809 324 aaKnown RBP7.82□□□□□ -1.16
CD44-205ENST00000352818 CTBSQ01459 385 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 TAP2Q03519 686 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 LRRC74AQ0VAA2 488 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 MED21Q13503 144 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 C1orf61Q13536 156 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 TMEM259Q4ZIN3 620 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 RUNDC3AQ59EK9 446 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 TBCELQ5QJ74 424 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 INTS11Q5TA45 600 aaKnown RBP7.82□□□□□ -1.16
CD44-205ENST00000352818 METRNLQ641Q3 311 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 HMBOX1Q6NT76 420 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 MED27Q6P2C8 311 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 GALNT18Q6P9A2 607 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 CRTC3Q6UUV7 619 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 NXPE4Q6UWF7 544 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 FKBP9P1Q75LS8 142 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 AMZ2Q86W34 360 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 CALHM3Q86XJ0 350 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 MSRB3Q8IXL7 192 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 TBC1D21Q8IYX1 336 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 TMEM132CQ8N3T6 1108 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 KRTCAP2Q8N6L1 136 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 TP53I13Q8NBR0 393 aaPredicted RBP7.82□□□□□ -1.16
CD44-205ENST00000352818 TRPV3Q8NET8 790 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 OR7G3Q8NG95 312 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 OR8J2Q8NGG1 315 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 CHTF18Q8WVB6 975 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 CANT1Q8WVQ1 401 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 LRTOMTQ8WZ04 291 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 NEIL2Q969S2 332 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 UBE2E3Q969T4 207 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 RAD51AP1Q96B01 352 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 ZNF597Q96LX8 424 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 OR52E6Q96RD3 313 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 CPPED1Q9BRF8 314 aaPredicted RBP7.82□□□□□ -1.16
CD44-205ENST00000352818 TIMM29Q9BSF4 260 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 HAUS8Q9BT25 410 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 C1QTNF7Q9BXJ2 289 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 C1QTNF2Q9BXJ5 285 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 MFRPQ9BY79 579 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 PITHD1Q9GZP4 211 aaPredicted RBP7.82□□□□□ -1.16
CD44-205ENST00000352818 WDR26Q9H7D7 661 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 GORASP2Q9H8Y8 452 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 PELI2Q9HAT8 420 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 SERHLQ9NQF3 203 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 CCDC177Q9NQR7 707 aaPredicted RBP7.82□□□□□ -1.16
CD44-205ENST00000352818 PHPT1Q9NRX4 125 aaPredicted RBP7.82□□□□□ -1.16
CD44-205ENST00000352818 AGPAT4Q9NRZ5 378 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 SLC25A37Q9NYZ2 338 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 VAPAQ9P0L0 249 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 SLAMF8Q9P0V8 285 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 GMPR2Q9P2T1 348 aaKnown RBP7.82□□□□□ -1.16
CD44-205ENST00000352818 FAM8A1Q9UBU6 413 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 ADGRE2Q9UHX3 823 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 SCOCQ9UIL1 159 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 ACSL5Q9ULC5 683 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 B3GALT1Q9Y5Z6 326 aa7.82□□□□□ -1.16
CD44-205ENST00000352818 MRPS18BQ9Y676 258 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms