RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 HTR1AP08908 422 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 CTSEP14091 401 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 SP2Q02086 613 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 ABCA11PQ4W5N1 156 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 LARP4Q71RC2 724 aaKnown RBP eCLIP17.39■□□□□ 0.371e-17■■■■□ 24.2
SMC4-201ENST00000344722 B3GNT8Q7Z7M8 397 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 PROKR2Q8NFJ6 384 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 SPACA7Q96KW9 195 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 LRR1Q96L50 414 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 ACTC1P68032 377 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 ACTA1P68133 377 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 CHADLQ6NUI6 762 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 FAM122CQ6P4D5 195 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 CHST9Q7L1S5 443 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 KCTD9Q7L273 389 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 RIPOR3Q96MK2 946 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 POU2F3Q9UKI9 436 aa17.39■□□□□ 0.37
SMC4-201ENST00000344722 KDELR3O43731 214 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 KCNE1P15382 129 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 VARS2Q5ST30 1063 aaKnown RBP17.38■□□□□ 0.37
SMC4-201ENST00000344722 LRRC69Q6ZNQ3 347 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 CD300LFQ8TDQ1 290 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 CLCC1Q96S66 551 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 C20orf27Q9GZN8 174 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 TMEM168Q9H0V1 697 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 KCPQ6ZWJ8 1503 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 HCRTO43612 131 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 UGT2B10P36537 528 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 HK3P52790 923 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 MS4A13Q5J8X5 152 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 AGTRAPQ6RW13 159 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 VTCN1Q7Z7D3 282 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 CLDN19Q8N6F1 224 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 ADAMTS16Q8TE57 1224 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 TXNDC15Q96J42 360 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 C1orf74Q96LT6 269 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 ZNF778Q96MU6 729 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 NANSQ9NR45 359 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 UTS2RQ9UKP6 389 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 PCDHGB2Q9Y5G2 931 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 HSD3B1P14060 373 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 HSD3B2P26439 372 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 PGDP52209 483 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 RPS24P62847 133 aaKnown RBP17.38■□□□□ 0.37
SMC4-201ENST00000344722 SCAPQ12770 1279 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 TBCEQ15813 527 aaPredicted RBP17.38■□□□□ 0.37
SMC4-201ENST00000344722 COL28A1Q2UY09 1125 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 PYHIN1Q6K0P9 492 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 CNIH2Q6PI25 160 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 POMZP3Q6PJE2 187 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 FAM217AQ8IXS0 508 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 POGLUT1Q8NBL1 392 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 OR4K1Q8NGD4 311 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 AHCYL2Q96HN2 611 aaKnown RBP17.38■□□□□ 0.37
SMC4-201ENST00000344722 C12orf42Q96LP6 360 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 PAK4O96013 591 aaPredicted RBP17.38■□□□□ 0.37
SMC4-201ENST00000344722 JUNP05412 331 aaKnown RBP17.38■□□□□ 0.37
SMC4-201ENST00000344722 SLC6A6P31641 620 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 CSKP41240 450 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 GRSF1Q12849 480 aaKnown RBP eCLIP17.38■□□□□ 0.372e-14■■■■■ 48.8
SMC4-201ENST00000344722 PARGQ86W56 976 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 ADAMTS19Q8TE59 1207 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 GAL3ST3Q96A11 431 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 DPH2Q9BQC3 489 aaPredicted RBP17.38■□□□□ 0.37
SMC4-201ENST00000344722 RAB11FIP5Q9BXF6 653 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 PCDHB14Q9Y5E9 798 aa17.38■□□□□ 0.37
SMC4-201ENST00000344722 TNFRSF10AO00220 468 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 B3GALT2O43825 422 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 ARHGEF15O94989 841 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 GK2Q14410 553 aaPredicted RBP17.37■□□□□ 0.37
SMC4-201ENST00000344722 CCDC58Q4VC31 144 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 ZNF648Q5T619 568 aaPredicted RBP17.37■□□□□ 0.37
SMC4-201ENST00000344722 SLC24A5Q71RS6 500 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 OR2T33Q8NG76 320 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 NT5DC2Q9H857 520 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 PSMD9O00233 223 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 GTF2F2P13984 249 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 MICAQ29983 383 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 PLAG1Q6DJT9 500 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 GRHL3Q8TE85 626 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 SLC22A17Q8WUG5 538 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 SCML2Q9UQR0 700 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 ZNF705EA8MWA4 302 aaPredicted RBP17.37■□□□□ 0.37
SMC4-201ENST00000344722 KCNA5P22460 613 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 GGT2P36268 569 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 MLLT10P55197 1068 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 ARFRP1Q13795 201 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 POU4F3Q15319 338 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 LINC00299Q6ZSB3 139 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 OR52E4Q8NGH9 312 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 FANK1Q8TC84 345 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 ARNTL2Q8WYA1 636 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 HDHD5Q9BXW7 423 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 ZNF436Q9C0F3 470 aaPredicted RBP17.37■□□□□ 0.37
SMC4-201ENST00000344722 SUV39H2Q9H5I1 410 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 FARSAQ9Y285 508 aaKnown RBP17.37■□□□□ 0.37
SMC4-201ENST00000344722 A0A1W2PQ09 198 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 CNR2P34972 360 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 GPR68Q15743 365 aa17.37■□□□□ 0.37
SMC4-201ENST00000344722 NHSL2Q5HYW2 709 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms