RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 H2AFYO75367 372 aaKnown RBP14.5□□□□□ -0.09
LINC01116-202ENST00000339037 WDR47O94967 919 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 SEC31AO94979 1220 aaKnown RBP14.5□□□□□ -0.09
LINC01116-202ENST00000339037 ZWINTO95229 277 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 IFNA16P05015 189 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 C1GALT1C1LP0DN25 315 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 ACVR2AP27037 513 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 HPDP32754 393 aaPredicted RBP14.5□□□□□ -0.09
LINC01116-202ENST00000339037 SOX3P41225 446 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 PLA2G16P53816 162 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 SLBPQ14493 270 aaKnown RBP eCLIP14.5□□□□□ -0.09
LINC01116-202ENST00000339037 ZNF460Q14592 562 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 FASTKD3Q14CZ7 662 aaKnown RBP14.5□□□□□ -0.09
LINC01116-202ENST00000339037 CES4AQ5XG92 561 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 HSDL2Q6YN16 418 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 SLCO4C1Q6ZQN7 724 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 ADAMTSL2Q86TH1 951 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 CLYBLQ8N0X4 340 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 NKAPQ8N5F7 415 aaKnown RBP14.5□□□□□ -0.09
LINC01116-202ENST00000339037 OR5M9Q8NGP3 310 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 DAZLQ92904 295 aaKnown RBP14.5□□□□□ -0.09
LINC01116-202ENST00000339037 SMC6Q96SB8 1091 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 NAPGQ99747 312 aaPredicted RBP14.5□□□□□ -0.09
LINC01116-202ENST00000339037 TRIM31Q9BZY9 425 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 REXO4Q9GZR2 422 aaKnown RBP14.5□□□□□ -0.09
LINC01116-202ENST00000339037 PYCARDQ9ULZ3 195 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 PSAT1Q9Y617 370 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 SAR1BQ9Y6B6 198 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 VPS13CQ709C8 3753 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 ABCA4P78363 2273 aa14.5□□□□□ -0.09
LINC01116-202ENST00000339037 HCFC1P51610 2035 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 G3V3Y1 287 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 CYR61O00622 381 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 CLEC3AO75596 197 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 CERS1P27544 350 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 GDF5P43026 501 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 ARL4CP56559 192 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 RCN2Q14257 317 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 KRTAP21-3Q3LHN1 58 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 NDUFAF5Q5TEU4 345 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 ZNF585AQ6P3V2 769 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 TRIM40Q6P9F5 258 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 B3GNT6Q6ZMB0 384 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 KRT78Q8N1N4 520 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 OR2L5Q8NG80 312 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 OR10Q1Q8NGQ4 319 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 OR14A16Q8NHC5 309 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 SREK1Q8WXA9 508 aaKnown RBP14.49□□□□□ -0.09
LINC01116-202ENST00000339037 LRRC39Q96DD0 335 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 RUNDC3BQ96NL0 473 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 QRFPRQ96P65 431 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 CSF3RQ99062 836 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 FAM173AQ9BQD7 235 aa14.49□□□□□ -0.09
LINC01116-202ENST00000339037 COPS7BQ9H9Q2 264 aaPredicted RBP14.49□□□□□ -0.09
LINC01116-202ENST00000339037 FLNAP21333 2647 aaKnown RBP14.49□□□□□ -0.09
LINC01116-202ENST00000339037 ANKDD1BA6NHY2 528 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 CCDC188H7C350 402 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 DIAPH2O60879 1101 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 GLSO94925 669 aaPredicted RBP14.48□□□□□ -0.09
LINC01116-202ENST00000339037 DNAJA1P31689 397 aaKnown RBP14.48□□□□□ -0.09
LINC01116-202ENST00000339037 MAGEA5P43359 124 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 SLC6A12P48065 614 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 HK2P52789 917 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 MTTPP55157 894 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 LIM2P55344 173 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 STX4Q12846 297 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 PDIA2Q13087 525 aaKnown RBP14.48□□□□□ -0.09
LINC01116-202ENST00000339037 EFTUD2Q15029 972 aaKnown RBP eCLIP14.48□□□□□ -0.09
LINC01116-202ENST00000339037 TSNQ15631 228 aaKnown RBP14.48□□□□□ -0.09
LINC01116-202ENST00000339037 C18orf21Q32NC0 220 aaPredicted RBP14.48□□□□□ -0.09
LINC01116-202ENST00000339037 ADPRMQ3LIE5 342 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 RTL4Q6ZR62 310 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 ZC3HC1Q86WB0 502 aaKnown RBP14.48□□□□□ -0.09
LINC01116-202ENST00000339037 FAM109AQ8N4B1 249 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 TMEM251Q8N6I4 163 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 MORN4Q8NDC4 146 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 FBXO36Q8NEA4 188 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 MYRIPQ8NFW9 859 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 PTPMT1Q8WUK0 201 aaPredicted RBP14.48□□□□□ -0.09
LINC01116-202ENST00000339037 RHBDF1Q96CC6 855 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 SCYL1Q96KG9 808 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 SERINC2Q96SA4 455 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 TTYH2Q9BSA4 534 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 OR8D2Q9GZM6 311 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 PITHD1Q9GZP4 211 aaPredicted RBP14.48□□□□□ -0.09
LINC01116-202ENST00000339037 CTNNAL1Q9UBT7 734 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 DAPP1Q9UN19 280 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 LIPGQ9Y5X9 500 aa14.48□□□□□ -0.09
LINC01116-202ENST00000339037 PHF3Q92576 2039 aaKnown RBP14.48□□□□□ -0.09
LINC01116-202ENST00000339037 FAM95CA0A1B0GW59 222 aa14.47□□□□□ -0.09
LINC01116-202ENST00000339037 NCF1BA6NI72 391 aaPredicted RBP14.47□□□□□ -0.09
LINC01116-202ENST00000339037 NCF1CA8MVU1 366 aaPredicted RBP14.47□□□□□ -0.09
LINC01116-202ENST00000339037 E7ESA3 106 aa14.47□□□□□ -0.09
LINC01116-202ENST00000339037 KLK8O60259 260 aa14.47□□□□□ -0.09
LINC01116-202ENST00000339037 CTNSO60931 367 aa14.47□□□□□ -0.09
LINC01116-202ENST00000339037 TBX6O95947 436 aaPredicted RBP14.47□□□□□ -0.09
LINC01116-202ENST00000339037 IGHG3P01860 377 aa14.47□□□□□ -0.09
LINC01116-202ENST00000339037 NCF1P14598 390 aaPredicted RBP14.47□□□□□ -0.09
LINC01116-202ENST00000339037 RPL21P46778 160 aaKnown RBP14.47□□□□□ -0.09
LINC01116-202ENST00000339037 TAS2R39P59534 338 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms