RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 CTRCQ99895 268 aa12.85□□□□□ -0.35
PRPF18-201ENST00000320054 DPH2Q9BQC3 489 aaPredicted RBP12.85□□□□□ -0.35
PRPF18-201ENST00000320054 WDR41Q9HAD4 459 aa12.85□□□□□ -0.35
PRPF18-201ENST00000320054 TAS2R7Q9NYW3 318 aa12.85□□□□□ -0.35
PRPF18-201ENST00000320054 MAP4K5Q9Y4K4 846 aa12.85□□□□□ -0.35
PRPF18-201ENST00000320054 TMEM184BQ9Y519 407 aaPredicted RBP12.85□□□□□ -0.35
PRPF18-201ENST00000320054 PCDHGA8Q9Y5G5 932 aa12.85□□□□□ -0.35
PRPF18-201ENST00000320054 SDK2Q58EX2 2172 aa12.85□□□□□ -0.35
PRPF18-201ENST00000320054 NUP214P35658 2090 aaPredicted RBP12.84□□□□□ -0.35
PRPF18-201ENST00000320054 GABRR3A8MPY1 467 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 EBAG9O00559 213 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 CYR61O00622 381 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 AIFM1O95831 613 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 NTRK1P04629 796 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 SNRPB2P08579 225 aaKnown RBP12.84□□□□□ -0.35
PRPF18-201ENST00000320054 NR2F6P10588 404 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 PIM1P11309 404 aaPredicted RBP12.84□□□□□ -0.35
PRPF18-201ENST00000320054 COX7A2P14406 83 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 ITGAXP20702 1163 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 FBLP22087 321 aaKnown RBP12.84□□□□□ -0.35
PRPF18-201ENST00000320054 KCNK10P57789 538 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 OLR1P78380 273 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 MC1RQ01726 317 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 ABHD18Q0P651 414 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 C3orf38Q5JPI3 329 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 TMEM164Q5U3C3 297 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 C18orf63Q68DL7 685 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 RIPOR1Q6ZS17 1223 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 MSANTD1Q6ZTZ1 278 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 DSELQ8IZU8 1212 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 OR8J2Q8NGG1 315 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 OR51Q1Q8NH59 317 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 RP9Q8TA86 221 aaKnown RBP12.84□□□□□ -0.35
PRPF18-201ENST00000320054 GFM2Q969S9 779 aaKnown RBP12.84□□□□□ -0.35
PRPF18-201ENST00000320054 PMEPA1Q969W9 287 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 COL26A1Q96A83 441 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 PPCDCQ96CD2 204 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 CMTM5Q96DZ9 223 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 SLC45A3Q96JT2 553 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 OR1F2PQ96R84 312 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 TUBB6Q9BUF5 446 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 SLC25A23Q9BV35 468 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 SLC52A3Q9NQ40 469 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 MIEF1Q9NQG6 463 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 ATAD3AQ9NVI7 634 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 HCN3Q9P1Z3 774 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 CES1P1Q9UKY3 287 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 SATB2Q9UPW6 733 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 MRPS33Q9Y291 106 aaKnown RBP12.84□□□□□ -0.35
PRPF18-201ENST00000320054 B3GALT1Q9Y5Z6 326 aa12.84□□□□□ -0.35
PRPF18-201ENST00000320054 A0A1W2PP18 115 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 BBIP1A8MTZ0 92 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 CFLARO15519 480 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 KIAA0754O94854 1291 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 COX4I1P13073 169 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 ZNF28P17035 718 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 S100A3P33764 101 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 OR1D4P47884 311 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 DCDP81605 110 aaKnown RBP12.83□□□□□ -0.36
PRPF18-201ENST00000320054 SHC2P98077 582 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 FAM174BQ3ZCQ3 159 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 NKAIN1Q4KMZ8 207 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 COQ5Q5HYK3 327 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 SPANXN4Q5MJ08 99 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 CPTPQ5TA50 214 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 ARHGAP40Q5TG30 622 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 C1orf189Q5VU69 101 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 OR52E8Q6IFG1 317 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 SLC48A1Q6P1K1 146 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 IGF2-ASQ6U949 168 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 GK5Q6ZS86 529 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 SNX32Q86XE0 403 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 TICAM1Q8IUC6 712 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 ZNF595Q8IYB9 648 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 METTL27Q8N6F8 245 aaPredicted RBP12.83□□□□□ -0.36
PRPF18-201ENST00000320054 FAM47BQ8NA70 645 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 OR7A2PQ8NGA2 310 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 DNAJB14Q8TBM8 379 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.83□□□□□ -0.36
PRPF18-201ENST00000320054 TANKQ92844 425 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 TBC1D20Q96BZ9 403 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 SPDL1Q96EA4 605 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 ULBP3Q9BZM4 244 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 SPRY4Q9C004 299 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 BHLHE41Q9C0J9 482 aaPredicted RBP12.83□□□□□ -0.36
PRPF18-201ENST00000320054 RPF2Q9H7B2 306 aaKnown RBP12.83□□□□□ -0.36
PRPF18-201ENST00000320054 POLR1BQ9H9Y6 1135 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 MKKSQ9NPJ1 570 aaPredicted RBP12.83□□□□□ -0.36
PRPF18-201ENST00000320054 ARL8BQ9NVJ2 186 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 TAGLN3Q9UI15 199 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 PSME2Q9UL46 239 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 MAU2Q9Y6X3 613 aa12.83□□□□□ -0.36
PRPF18-201ENST00000320054 IGLV3-12A0A075B6K2 115 aa12.82□□□□□ -0.36
PRPF18-201ENST00000320054 DCDC2BA2VCK2 349 aa12.82□□□□□ -0.36
PRPF18-201ENST00000320054 PMS2P1A4D2B8 440 aa12.82□□□□□ -0.36
PRPF18-201ENST00000320054 CCDC154A6NI56 674 aa12.82□□□□□ -0.36
PRPF18-201ENST00000320054 C9orf172C9J069 976 aa12.82□□□□□ -0.36
PRPF18-201ENST00000320054 C9JVG2 144 aa12.82□□□□□ -0.36
PRPF18-201ENST00000320054 MEN1O00255 615 aa12.82□□□□□ -0.36
PRPF18-201ENST00000320054 NR5A2O00482 541 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms