RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 H2AFYO75367 372 aaKnown RBP13.2□□□□□ -0.3
RPP40-201ENST00000319533 CLEC3AO75596 197 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 OR2J2O76002 312 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 PDE9AO76083 593 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 OR6B1O95007 311 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 IGHG3P01860 377 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 CD1EP15812 388 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 NUP107P57740 925 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 SLC7A5Q01650 507 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 HYAL4Q2M3T9 481 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 GXYLT1Q4G148 440 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 C16orf47Q6ZP98 133 aaPredicted RBP13.2□□□□□ -0.3
RPP40-201ENST00000319533 C3orf62Q6ZUJ4 267 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 TMEM132CQ8N3T6 1108 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 OR2L5Q8NG80 312 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 RHBDF1Q96CC6 855 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 RASL10BQ96S79 203 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 LRRC1Q9BTT6 524 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 EHD1Q9H4M9 534 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 SLC24A3Q9HC58 644 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 HPF1Q9NWY4 346 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 ERVK-11Q9UQG0 969 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 MRPS33Q9Y291 106 aaKnown RBP13.2□□□□□ -0.3
RPP40-201ENST00000319533 ITPR3Q14573 2671 aa13.2□□□□□ -0.3
RPP40-201ENST00000319533 ZNF469Q96JG9 3925 aaPredicted RBP13.19□□□□□ -0.3
RPP40-201ENST00000319533 A0A088AWK7 358 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 TCRBV9S1A1TA0A576 114 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 ESYT3A0FGR9 886 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 NPEPPSL1A6NEC2 478 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 FAM90A27PA6NNH2 459 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 ERI3O43414 337 aaKnown RBP13.19□□□□□ -0.3
RPP40-201ENST00000319533 B3GALT2O43825 422 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 KLK8O60259 260 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 CTAGE8P0CG41 777 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 HOXB1P14653 301 aaPredicted RBP13.19□□□□□ -0.3
RPP40-201ENST00000319533 ZNF10P21506 573 aaPredicted RBP13.19□□□□□ -0.3
RPP40-201ENST00000319533 STX2P32856 288 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 MAGEA4P43358 317 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 TAS2R39P59534 338 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 PMPCAQ10713 525 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 SLC13A2Q13183 592 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 SLBPQ14493 270 aaKnown RBP eCLIP13.19□□□□□ -0.3
RPP40-201ENST00000319533 NDUFAF5Q5TEU4 345 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 ABHD17CQ6PCB6 329 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 ZDHHC24Q6UX98 284 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 HSDL2Q6YN16 418 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 CYS1Q717R9 158 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 VN1R5Q7Z5H4 357 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 ADAMTSL2Q86TH1 951 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 SLC22A16Q86VW1 577 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 CCDC71Q8IV32 467 aaPredicted RBP13.19□□□□□ -0.3
RPP40-201ENST00000319533 CTAGE4Q8IX94 777 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 CEP112Q8N8E3 955 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 MORN4Q8NDC4 146 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 OR8K3Q8NH51 312 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 PTPMT1Q8WUK0 201 aaPredicted RBP13.19□□□□□ -0.3
RPP40-201ENST00000319533 ASB15Q8WXK1 588 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 DAZLQ92904 295 aaKnown RBP13.19□□□□□ -0.3
RPP40-201ENST00000319533 TSPAN17Q96FV3 270 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 SERINC2Q96SA4 455 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 CPNE1Q99829 537 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 MCMBPQ9BTE3 642 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 CAPS2Q9BXY5 557 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 TTTY12Q9BZ98 90 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 POPDC3Q9HBV1 291 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 GPRC5BQ9NZH0 403 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 VTI1BQ9UEU0 232 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.19□□□□□ -0.3
RPP40-201ENST00000319533 DAPP1Q9UN19 280 aa13.19□□□□□ -0.3
RPP40-201ENST00000319533 V9GYY5 206 aaPredicted RBP13.19□□□□□ -0.3
RPP40-201ENST00000319533 A0A0G2JMM0 328 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 A0A0G2JN53 185 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 A0A1W2PPB8 328 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 A0A1W2PRS3 328 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 FAM159BA6NKW6 160 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 KIR3DP1A8MWS1 328 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 ACOT7O00154 380 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 BCKDKO14874 412 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 WDR47O94967 919 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 CNR1P21554 472 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 ACVR2AP27037 513 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 HPDP32754 393 aaPredicted RBP13.18□□□□□ -0.3
RPP40-201ENST00000319533 GGT5P36269 586 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 GP5P40197 560 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 SOX3P41225 446 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 GDF5P43026 501 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 HK2P52789 917 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 MTTPP55157 894 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 LIM2P55344 173 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 POU4F1Q01851 419 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 GUCY2DQ02846 1103 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 EFTUD2Q15029 972 aaKnown RBP eCLIP13.18□□□□□ -0.3
RPP40-201ENST00000319533 TRADDQ15628 312 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 TSNQ15631 228 aaKnown RBP13.18□□□□□ -0.3
RPP40-201ENST00000319533 C18orf21Q32NC0 220 aaPredicted RBP13.18□□□□□ -0.3
RPP40-201ENST00000319533 IL20RBQ6UXL0 311 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 RTL4Q6ZR62 310 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 TRILQ7L0X0 811 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 CTAGE3PQ8IX95 158 aa13.18□□□□□ -0.3
RPP40-201ENST00000319533 KRT78Q8N1N4 520 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms