RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 AKAP13Q12802 2813 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 CEP295Q9C0D2 2601 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 IGHV5-10-1A0A0J9YXX1 117 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 GSAPA4D1B5 854 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 TMX2-CTNND1H3BSU7 103 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 BTN3A1O00481 513 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 ATP5HO75947 161 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 OTCP00480 354 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 IL1AP01583 271 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 ADRB1P08588 477 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 CHRM5P08912 532 aaPredicted RBP7.86□□□□□ -1.15
CHD6-201ENST00000309279 HIST1H2AGP0C0S8 130 aaPredicted RBP7.86□□□□□ -1.15
CHD6-201ENST00000309279 ANKRD34CP0C6C1 535 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 DDX5P17844 614 aaKnown RBP7.86□□□□□ -1.15
CHD6-201ENST00000309279 POLR2CP19387 275 aaPredicted RBP7.86□□□□□ -1.15
CHD6-201ENST00000309279 HIST1H2ADP20671 130 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 PRDX3P30048 256 aaKnown RBP7.86□□□□□ -1.15
CHD6-201ENST00000309279 GMPRP36959 345 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 GFERP55789 205 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 CDKL1Q00532 357 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 CSHL1Q14406 222 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 KIR2DS3Q14952 304 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 FAM83EQ2M2I3 478 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 CDKL4Q5MAI5 379 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 KLHL24Q6TFL4 600 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 METAP1DQ6UB28 335 aaPredicted RBP7.86□□□□□ -1.15
CHD6-201ENST00000309279 ATG14Q6ZNE5 492 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 SH2D5Q6ZV89 423 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 B3GNT8Q7Z7M8 397 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 LRRC56Q8IYG6 542 aaPredicted RBP7.86□□□□□ -1.15
CHD6-201ENST00000309279 CYP4X1Q8N118 509 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 ZCCHC7Q8N3Z6 543 aaKnown RBP7.86□□□□□ -1.15
CHD6-201ENST00000309279 RIBC1Q8N443 379 aaPredicted RBP7.86□□□□□ -1.15
CHD6-201ENST00000309279 SPATA6LQ8N4H0 392 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 RAB42Q8N4Z0 105 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 CCDC63Q8NA47 563 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 FLVCR1-AS1Q8TAF5 88 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 RHEBL1Q8TAI7 183 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 ZNF480Q8WV37 535 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 MUL1Q969V5 352 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 FAM162AQ96A26 154 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 PTERQ96BW5 349 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 KTI12Q96EK9 354 aaPredicted RBP7.86□□□□□ -1.15
CHD6-201ENST00000309279 HIST1H2AHQ96KK5 128 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 FCRL4Q96PJ5 515 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 OR2A14Q96R47 310 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 CD180Q99467 661 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 TM9SF2Q99805 663 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 HIST1H2AJQ99878 128 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 H2AFJQ9BTM1 129 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 TRIM54Q9BYV2 358 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 PITPNM3Q9BZ71 974 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 SEMA6CQ9H3T2 930 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 NMRAL1Q9HBL8 299 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 TMEM9Q9P0T7 183 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 CTNNAL1Q9UBT7 734 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 POMT2Q9UKY4 750 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 PLAGL1Q9UM63 463 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 OARD1Q9Y530 152 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 NCOR2Q9Y618 2525 aa7.86□□□□□ -1.15
CHD6-201ENST00000309279 A0A1W2PPV9 198 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 PIPSLA2A3N6 862 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 AQP12BA6NM10 295 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 ZNF839A8K0R7 811 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 C2orf74A8MZ97 194 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 E7ENX8 843 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 PTGES3LE9PB15 166 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 HGSO14964 777 aaPredicted RBP7.85□□□□□ -1.15
CHD6-201ENST00000309279 ANGPT2O15123 496 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 CSO75390 466 aaKnown RBP7.85□□□□□ -1.15
CHD6-201ENST00000309279 STAG3L3P0CL85 134 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 NCF1P14598 390 aaPredicted RBP7.85□□□□□ -1.15
CHD6-201ENST00000309279 H2AFXP16104 143 aaPredicted RBP7.85□□□□□ -1.15
CHD6-201ENST00000309279 ABCD3P28288 659 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 IMPA1P29218 277 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 PEBP1P30086 187 aaKnown RBP7.85□□□□□ -1.15
CHD6-201ENST00000309279 SLCO1A2P46721 670 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 KCNC1P48547 511 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 RNF144AP50876 292 aaPredicted RBP7.85□□□□□ -1.15
CHD6-201ENST00000309279 KPNA2P52292 529 aaKnown RBP7.85□□□□□ -1.15
CHD6-201ENST00000309279 PNLIPRP1P54315 467 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 CLDN6P56747 220 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 PPP1CAP62136 330 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 IRF9Q00978 393 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 OCRLQ01968 901 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 IFFO1Q0D2I5 559 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 PRKAA1Q13131 559 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 TARDBPQ13148 414 aaKnown RBP eCLIP7.85□□□□□ -1.15
CHD6-201ENST00000309279 DDX39BQ13838 428 aaKnown RBP7.85□□□□□ -1.15
CHD6-201ENST00000309279 TGFBIQ15582 683 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 OR4D1Q15615 310 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 TSNQ15631 228 aaKnown RBP7.85□□□□□ -1.15
CHD6-201ENST00000309279 TBCEQ15813 527 aaPredicted RBP7.85□□□□□ -1.15
CHD6-201ENST00000309279 ZXDCQ2QGD7 858 aaPredicted RBP7.85□□□□□ -1.15
CHD6-201ENST00000309279 VWA5B1Q5TIE3 1220 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 ABHD17CQ6PCB6 329 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 HDXQ7Z353 690 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 PRSS42Q7Z5A4 293 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 ANKFN1Q8N957 763 aa7.85□□□□□ -1.15
CHD6-201ENST00000309279 OR13C2Q8NGS9 318 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms