RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 STARD5Q9NSY2 213 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 TMEM9Q9P0T7 183 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 KLHL3Q9UH77 587 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 BTNL2Q9UIR0 455 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 SLC6A14Q9UN76 642 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 ATG4BQ9Y4P1 393 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 RP1P56715 2156 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 ASXL3Q9C0F0 2248 aa6.6□□□□□ -1.35
PTCD2-201ENST00000308077 UBR5O95071 2799 aaPredicted RBP6.6□□□□□ -1.35
PTCD2-201ENST00000308077 C15orf38-AP3S2A0A0A6YYH1 394 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 PRSS51A0A1B0GVH4 220 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 A0A1W2PR48 441 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 WASHC1A8K0Z3 465 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 H0Y3Z8 333 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 TBX19O60806 448 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 BCAS2O75934 225 aaPredicted RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 PSMG1O95456 288 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 CPSF4O95639 269 aaKnown RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 C6orf47O95873 294 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 CD1CP29017 333 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 RPL3P39023 403 aaKnown RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 TSFMP43897 325 aaKnown RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 GPR3P46089 330 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 GSTM5P46439 218 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 TRPC1P48995 793 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 ALDH9A1P49189 494 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 PPM1FP49593 454 aaPredicted RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 CCT8P50990 548 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 EEFSECP57772 596 aaKnown RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 BTN3A2P78410 334 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 GAB1Q13480 694 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 FLOT2Q14254 428 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 SLC9A5Q14940 896 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 AMZ1Q400G9 498 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 PERM1Q5SV97 790 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 NDUFAF5Q5TEU4 345 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 TCEAL6Q6IPX3 200 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 TMEM214Q6NUQ4 689 aaKnown RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 GUSBP11Q6P575 273 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 ZNF551Q7Z340 670 aaPredicted RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 GPR155Q7Z3F1 870 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 SPRED1Q7Z699 444 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 ARPINQ7Z6K5 226 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 RABEPKQ7Z6M1 372 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 CSNK1A1LQ8N752 337 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 FAM47BQ8NA70 645 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 CAMKVQ8NCB2 501 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 SRFBP1Q8NEF9 429 aaKnown RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 DNAJB8Q8NHS0 232 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 KLHL6Q8WZ60 621 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 TCEAL3Q969E4 200 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 RERGQ96A58 199 aaPredicted RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 AHCYL2Q96HN2 611 aaKnown RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 PANX1Q96RD7 426 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 PRPF18Q99633 342 aaKnown RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 MAPKAP1Q9BPZ7 522 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 DUSP23Q9BVJ7 150 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 TRIM4Q9C037 500 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 ALG2Q9H553 416 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 PIF1Q9H611 641 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 MIEF1Q9NQG6 463 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 EGFL7Q9UHF1 273 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 FBXW2Q9UKT8 454 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 WBP11Q9Y2W2 641 aaKnown RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 R4GN57 208 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 ABCA2Q9BZC7 2435 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 C1orf226A1L170 272 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 PGRMC2O15173 223 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 YKT6O15498 198 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 DUX1O43812 170 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 EPN2O95208 641 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 MED26O95402 600 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 CER1O95813 267 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 AIFM1O95831 613 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 IL1RNP18510 177 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 ATP6V1B2P21281 511 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 SOX11P35716 441 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 MPLP40238 635 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 GZMMP51124 257 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 OR4D2P58180 307 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 HBA1P69905 142 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 GPLD1P80108 840 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 TGM3Q08188 693 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 RUNX2Q13950 521 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 HEPACAMQ14CZ8 416 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 SUZ12Q15022 739 aaKnown RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 NR0B2Q15466 257 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 DEFB134Q4QY38 66 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 ANXA8L1Q5VT79 327 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 C18orf63Q68DL7 685 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 TMPRSS9Q7Z410 1059 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 IFNEQ86WN2 208 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 PDSS2Q86YH6 399 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 MCATQ8IVS2 390 aaKnown RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 CLEC4FQ8N1N0 589 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 DTWD1Q8N5C7 304 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 EID2Q8N6I1 236 aa6.59□□□□□ -1.35
PTCD2-201ENST00000308077 BHLHE22Q8NFJ8 381 aaPredicted RBP6.59□□□□□ -1.35
PTCD2-201ENST00000308077 OR4A15Q8NGL6 344 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms