RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 ZNF879B4DU55 563 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 GNSP15586 552 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 RNF144AP50876 292 aaPredicted RBP15.69■□□□□ 0.1
BRD3-201ENST00000303407 POU6F2P78424 691 aaPredicted RBP15.69■□□□□ 0.1
BRD3-201ENST00000303407 ADAM15Q13444 863 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 NIPAL1Q6NVV3 410 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 DPY19L2P1Q6NXN4 242 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 ZNF627Q7L945 461 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 ARMC1Q9NVT9 282 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 GJD2Q9UKL4 321 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 NHSQ6T4R5 1651 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 TCRBV5S1A1TA0A578 114 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 SLC35F4A4IF30 521 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 RPS17P08708 135 aaKnown RBP15.69■□□□□ 0.1
BRD3-201ENST00000303407 CTSAP10619 480 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 SLC6A6P31641 620 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 HLCSP50747 726 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 GABARAPL2P60520 117 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 SLC35F1Q5T1Q4 408 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.69■□□□□ 0.13e-9■■■■□ 19.9
BRD3-201ENST00000303407 PHOSPHO1Q8TCT1 267 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 C16orf78Q8WTQ4 265 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 TMEM125Q96AQ2 219 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 EPYCQ99645 322 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 CHIAQ9BZP6 476 aa15.69■□□□□ 0.1
BRD3-201ENST00000303407 TNRC6CQ9HCJ0 1690 aaKnown RBP15.69■□□□□ 0.1
BRD3-201ENST00000303407 A0A1B0GVT2 93 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 VSX2P58304 361 aaPredicted RBP15.68■□□□□ 0.1
BRD3-201ENST00000303407 NFE2L1Q14494 772 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 GALNTL5Q7Z4T8 443 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 SMARCD2Q92925 531 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 UTP4Q969X6 686 aaKnown RBP15.68■□□□□ 0.1
BRD3-201ENST00000303407 HRASLS2Q9NWW9 162 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 ERVK-11Q9UQG0 969 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 CPED1A4D0V7 1026 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 EMC8O43402 210 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 PABPC4LP0CB38 370 aaKnown RBP15.68■□□□□ 0.1
BRD3-201ENST00000303407 HK1P19367 917 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 NPRL3Q12980 569 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 C6orf120Q7Z4R8 191 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 GALNT10Q86SR1 603 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 TCEAL8Q8IYN2 117 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 CENPSQ8N2Z9 138 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 RBCK1Q9BYM8 510 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 MVB12BQ9H7P6 319 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 STOX2Q9P2F5 926 aaPredicted RBP15.68■□□□□ 0.1
BRD3-201ENST00000303407 SMAD6O43541 496 aaKnown RBP15.68■□□□□ 0.1
BRD3-201ENST00000303407 LAMP1P11279 417 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 CKMT1AP12532 417 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 RHCEP18577 417 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 INHBCP55103 352 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 VTCN1Q7Z7D3 282 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 PIANPQ8IYJ0 282 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 RIT1Q92963 219 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 TMEM165Q9HC07 324 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 HCN3Q9P1Z3 774 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 OR6C74A6NCV1 312 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 EIF3FO00303 357 aaPredicted RBP15.68■□□□□ 0.1
BRD3-201ENST00000303407 CCRL2O00421 344 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 RTCAO00442 366 aaKnown RBP15.68■□□□□ 0.1
BRD3-201ENST00000303407 MT-ND2P03891 347 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 VIPR2P41587 438 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 PON3Q15166 354 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 GTDC1Q4AE62 458 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 ARHGAP40Q5TG30 622 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 TOMM5Q8N4H5 51 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 OR2L5Q8NG80 312 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 RC3H2Q9HBD1 1191 aaKnown RBP15.68■□□□□ 0.1
BRD3-201ENST00000303407 PFDN2Q9UHV9 154 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 TMEM5Q9Y2B1 443 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 A0A1W2PQU0 124 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 C1orf226A1L170 272 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 BLOC1S5-TXNDC5H3BN57 136 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 ETFAP13804 333 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 SLC36A3Q495N2 470 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 IER5LQ5T953 404 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 ZSWIM9Q86XI8 627 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.68■□□□□ 0.1
BRD3-201ENST00000303407 PHF24Q9UPV7 400 aa15.68■□□□□ 0.1
BRD3-201ENST00000303407 ADRB3P13945 408 aa15.67■□□□□ 0.1
BRD3-201ENST00000303407 HRH2P25021 359 aa15.67■□□□□ 0.1
BRD3-201ENST00000303407 PRDX3P30048 256 aaKnown RBP15.67■□□□□ 0.1
BRD3-201ENST00000303407 OR12D2P58182 307 aa15.67■□□□□ 0.1
BRD3-201ENST00000303407 HNRNPA0Q13151 305 aaKnown RBP15.67■□□□□ 0.1
BRD3-201ENST00000303407 FLYWCH1Q4VC44 716 aa15.67■□□□□ 0.1
BRD3-201ENST00000303407 UNC5DQ6UXZ4 953 aa15.67■□□□□ 0.1
BRD3-201ENST00000303407 METTL27Q8N6F8 245 aaPredicted RBP15.67■□□□□ 0.1
BRD3-201ENST00000303407 Q8N9G6 341 aaPredicted RBP15.67■□□□□ 0.1
BRD3-201ENST00000303407 MKLN1Q9UL63 735 aa15.67■□□□□ 0.1
BRD3-201ENST00000303407 KAT7O95251 611 aa15.67■□□□□ 0.1
BRD3-201ENST00000303407 S100A1P23297 94 aa15.67■□□□□ 0.1
BRD3-201ENST00000303407 GTF2IRD2BQ6EKJ0 949 aa15.67■□□□□ 0.1
BRD3-201ENST00000303407 ALKBH2Q6NS38 261 aa15.67■□□□□ 0.1
BRD3-201ENST00000303407 ZNF517Q6ZMY9 492 aaPredicted RBP15.67■□□□□ 0.1
BRD3-201ENST00000303407 GALNT7Q86SF2 657 aa15.67■□□□□ 0.1
BRD3-201ENST00000303407 GTF2IRD2Q86UP8 949 aa15.67■□□□□ 0.1
BRD3-201ENST00000303407 MAL2Q969L2 176 aa15.67■□□□□ 0.1
BRD3-201ENST00000303407 WDR92Q96MX6 357 aa15.67■□□□□ 0.1
BRD3-201ENST00000303407 SAMD11Q96NU1 681 aa15.67■□□□□ 0.1
BRD3-201ENST00000303407 SEC14L4Q9UDX3 406 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms