RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 DHCR24Q15392 516 aa12.99□□□□□ -0.33
BCCIP-202ENST00000299130 ZNF770Q6IQ21 691 aaPredicted RBP12.99□□□□□ -0.33
BCCIP-202ENST00000299130 ARMC8Q8IUR7 673 aa12.99□□□□□ -0.33
BCCIP-202ENST00000299130 EPHX3Q9H6B9 360 aa12.99□□□□□ -0.33
BCCIP-202ENST00000299130 ZNF229Q9UJW7 825 aa12.99□□□□□ -0.33
BCCIP-202ENST00000299130 PAIP2BQ9ULR5 123 aaKnown RBP12.99□□□□□ -0.33
BCCIP-202ENST00000299130 SNX11Q9Y5W9 270 aa12.99□□□□□ -0.33
BCCIP-202ENST00000299130 PRRT4C9JH25 899 aa12.98□□□□□ -0.33
BCCIP-202ENST00000299130 PLPP1O14494 284 aa12.98□□□□□ -0.33
BCCIP-202ENST00000299130 BCHEP06276 602 aa12.98□□□□□ -0.33
BCCIP-202ENST00000299130 DGKGP49619 791 aa12.98□□□□□ -0.33
BCCIP-202ENST00000299130 SEC23BQ15437 767 aa12.98□□□□□ -0.33
BCCIP-202ENST00000299130 TPRG1LQ5T0D9 272 aa12.98□□□□□ -0.33
BCCIP-202ENST00000299130 TMIGD1Q6UXZ0 262 aa12.98□□□□□ -0.33
BCCIP-202ENST00000299130 CEACAM20Q6UY09 585 aa12.98□□□□□ -0.33
BCCIP-202ENST00000299130 SLC9B2Q86UD5 537 aa12.98□□□□□ -0.33
BCCIP-202ENST00000299130 RBM45Q8IUH3 476 aaKnown RBP12.98□□□□□ -0.33
BCCIP-202ENST00000299130 DEPDC4Q8N2C3 294 aa12.98□□□□□ -0.33
BCCIP-202ENST00000299130 GPR32P1Q8NGA4 272 aa12.98□□□□□ -0.33
BCCIP-202ENST00000299130 APOBEC4Q8WW27 367 aaKnown RBP12.98□□□□□ -0.33
BCCIP-202ENST00000299130 RAB8BQ92930 207 aa12.98□□□□□ -0.33
BCCIP-202ENST00000299130 NUS1Q96E22 293 aa12.98□□□□□ -0.33
BCCIP-202ENST00000299130 IL4I1Q96RQ9 567 aa12.98□□□□□ -0.33
BCCIP-202ENST00000299130 ZNF717Q9BY31 904 aaPredicted RBP12.98□□□□□ -0.33
BCCIP-202ENST00000299130 NXF2Q9GZY0 626 aaKnown RBP12.98□□□□□ -0.33
BCCIP-202ENST00000299130 MIEF1Q9NQG6 463 aa12.98□□□□□ -0.33
BCCIP-202ENST00000299130 TBC1D14Q9P2M4 693 aa12.98□□□□□ -0.33
BCCIP-202ENST00000299130 ANGPT4Q9Y264 503 aa12.98□□□□□ -0.33
BCCIP-202ENST00000299130 FAM32AQ9Y421 112 aaKnown RBP12.98□□□□□ -0.33
BCCIP-202ENST00000299130 TRIM43BA6NCK2 446 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 ZAR1LA6NP61 321 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 ZW10O43264 779 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 CYP17A1P05093 508 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 C6P13671 934 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 PTX3P26022 381 aaPredicted RBP12.97□□□□□ -0.33
BCCIP-202ENST00000299130 MAPK9P45984 424 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 CRISP1P54107 249 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 ELOAQ14241 798 aaKnown RBP12.97□□□□□ -0.33
BCCIP-202ENST00000299130 MED22Q15528 200 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 ARHGAP15Q53QZ3 475 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 FRMPD2BQ6IN97 320 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 C11orf96Q7Z7L8 435 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 FAM129CQ86XR2 697 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 REM2Q8IYK8 340 aaPredicted RBP12.97□□□□□ -0.33
BCCIP-202ENST00000299130 CYP4Z2PQ8N1L4 340 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 PARP16Q8N5Y8 322 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 SLC38A5Q8WUX1 472 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 TRIM43Q96BQ3 446 aaPredicted RBP12.97□□□□□ -0.33
BCCIP-202ENST00000299130 ITPKCQ96DU7 683 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 F2RL3Q96RI0 385 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 TMEM165Q9HC07 324 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 GPBP1L1Q9HC44 474 aaPredicted RBP12.97□□□□□ -0.33
BCCIP-202ENST00000299130 C11orf16Q9NQ32 467 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 SAGE1Q9NXZ1 904 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 MARK1Q9P0L2 795 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 TCF20Q9UGU0 1960 aaKnown RBP12.97□□□□□ -0.33
BCCIP-202ENST00000299130 CNOT3O75175 753 aaKnown RBP12.97□□□□□ -0.33
BCCIP-202ENST00000299130 SOX14O95416 240 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 KRT75O95678 551 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 IFNW1P05000 195 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 SRPRAP08240 638 aaKnown RBP12.97□□□□□ -0.33
BCCIP-202ENST00000299130 CLTBP09497 229 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 RHCEP18577 417 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 UQCRC2P22695 453 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 PIK3CBP42338 1070 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 SLC6A11P48066 632 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 ALDH9A1P49189 494 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 TSTQ16762 297 aaKnown RBP12.97□□□□□ -0.33
BCCIP-202ENST00000299130 PRAMEF14Q5SWL7 426 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 PRAMEF13Q5VWM6 474 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 PTCHD4Q6ZW05 846 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 GRASPQ7Z6J2 395 aaPredicted RBP12.97□□□□□ -0.33
BCCIP-202ENST00000299130 ANKRD53Q8N9V6 530 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 PLA2G15Q8NCC3 412 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 OR4D11Q8NGI4 311 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 LRIG1Q96JA1 1093 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 ANKHQ9HCJ1 492 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 ZDHHC4Q9NPG8 344 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 ITM2CQ9NQX7 267 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 CUEDC1Q9NWM3 386 aaPredicted RBP12.97□□□□□ -0.33
BCCIP-202ENST00000299130 ASF1AQ9Y294 204 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 MYO7AQ13402 2215 aa12.97□□□□□ -0.33
BCCIP-202ENST00000299130 FEZF1A0PJY2 475 aa12.96□□□□□ -0.33
BCCIP-202ENST00000299130 A8MVJ9 347 aa12.96□□□□□ -0.33
BCCIP-202ENST00000299130 KDM1AO60341 852 aa12.96□□□□□ -0.33
BCCIP-202ENST00000299130 KCNK2O95069 426 aa12.96□□□□□ -0.33
BCCIP-202ENST00000299130 CEBPBP17676 345 aa12.96□□□□□ -0.33
BCCIP-202ENST00000299130 PSMB5P28074 263 aa12.96□□□□□ -0.33
BCCIP-202ENST00000299130 SSX1Q16384 188 aa12.96□□□□□ -0.33
BCCIP-202ENST00000299130 REEP3Q6NUK4 255 aa12.96□□□□□ -0.33
BCCIP-202ENST00000299130 NCCRP1Q6ZVX7 275 aaPredicted RBP12.96□□□□□ -0.33
BCCIP-202ENST00000299130 OLIG3Q7RTU3 272 aa12.96□□□□□ -0.33
BCCIP-202ENST00000299130 BCDIN3DQ7Z5W3 292 aaKnown RBP12.96□□□□□ -0.33
BCCIP-202ENST00000299130 ATCAYQ86WG3 371 aa12.96□□□□□ -0.33
BCCIP-202ENST00000299130 POC5Q8NA72 575 aa12.96□□□□□ -0.33
BCCIP-202ENST00000299130 RSPRY1Q96DX4 576 aa12.96□□□□□ -0.33
BCCIP-202ENST00000299130 MTERF3Q96E29 417 aa12.96□□□□□ -0.33
BCCIP-202ENST00000299130 PDXPQ96GD0 296 aa12.96□□□□□ -0.33
BCCIP-202ENST00000299130 TMEM19Q96HH6 336 aa12.96□□□□□ -0.33
BCCIP-202ENST00000299130 OR52A5Q9H2C5 316 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms