RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 KCNE2Q9Y6J6 123 aa12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 POLR2AP24928 1970 aaKnown RBP12.92□□□□□ -0.34
RPUSD4-201ENST00000298317 I3L521 148 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 QSOX1O00391 747 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 BTN3A3O00478 584 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 PRAMEF1O95521 474 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 PRAMEF12O95522 483 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 STK19P49842 368 aaPredicted RBP12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 MVDP53602 400 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 PURAQ00577 322 aaKnown RBP12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 SF3A2Q15428 464 aaKnown RBP12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 CDKL4Q5MAI5 379 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 FRG2Q64ET8 278 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 CNIH2Q6PI25 160 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 METAP1DQ6UB28 335 aaPredicted RBP12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 ANKS3Q6ZW76 656 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 PDZD3Q86UT5 571 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 IL17RCQ8NAC3 791 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 SLC37A3Q8NCC5 494 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 DACT3Q96B18 629 aaPredicted RBP12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 KCTD7Q96MP8 289 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 FRG2BQ96QU4 278 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 GFM1Q96RP9 751 aaKnown RBP12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 SPON2Q9BUD6 331 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 NMNAT1Q9HAN9 279 aaPredicted RBP12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 COQ3Q9NZJ6 369 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 RPL36Q9Y3U8 105 aaKnown RBP12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 CDH10Q9Y6N8 788 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 F5H5T6 163 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 SGK494L7N484 410 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 SCAMP2O15127 329 aaKnown RBP12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 FABP7O15540 132 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 PRAMEF4O60810 478 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 GADD45GO95257 159 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 ZNF250P15622 560 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 IRS1P35568 1242 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 HMGCLP35914 325 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 SOX9P48436 509 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 RIN1Q13671 783 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 P2RY14Q15391 338 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 IGSF11Q5DX21 431 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 PRAMEF9Q5VWM5 478 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 FAM151BQ6UXP7 276 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 HDDC2Q7Z4H3 204 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 RNF175Q8N4F7 328 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 GEMIN6Q8WXD5 167 aaKnown RBP12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 CREB3L1Q96BA8 519 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 PDGFDQ9GZP0 370 aaPredicted RBP12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 PIGUQ9H490 435 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 GPATCH2Q9NW75 528 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 ST3GAL5Q9UNP4 418 aa12.91□□□□□ -0.34
RPUSD4-201ENST00000298317 LOC102723532A0A0G2JNH3 316 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 INMT-MINDY4F8WBC2 141 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 POMCP01189 267 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 HK1P19367 917 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 TYMPP19971 482 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 PTBP1P26599 531 aaKnown RBP eCLIP12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 POU1F1P28069 291 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 RPIAP49247 311 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 PSEN2P49810 448 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 RING1Q06587 406 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 NFE2L1Q14494 772 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 FLYWCH1Q4VC44 716 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 MACC1Q6ZN28 852 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 NPAS3Q8IXF0 933 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 OR8H3Q8N146 312 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 TMEM163Q8TC26 289 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 SUSD3Q96L08 255 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 PPIL3Q9H2H8 161 aaKnown RBP12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 HEXA-AS1Q9H8Q6 139 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 ARL15Q9NXU5 204 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 PRR23AA6NEV1 266 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 TRBC1P01850 177 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 TPOP07202 933 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 ZNF865P0CJ78 1059 aaPredicted RBP12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 SLC6A12P48065 614 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 GANABQ14697 944 aaKnown RBP12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 C10orf120Q5SQS8 335 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 C12orf73Q69YU5 71 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 WDR53Q7Z5U6 358 aaPredicted RBP12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 CAMKMTQ7Z624 323 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 GPR65Q8IYL9 337 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 LINC00518Q8N0U6 118 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 SYT14Q8NB59 555 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 OR52P1PQ8NH57 321 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 TMEM203Q969S6 136 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 TSSK6Q9BXA6 273 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 SYNDIG1Q9H7V2 258 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 REV1Q9UBZ9 1251 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 ZNF282Q9UDV7 671 aaPredicted RBP12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 PHF11Q9UIL8 331 aa12.9□□□□□ -0.34
RPUSD4-201ENST00000298317 PRAMEF33A0A0G2JMD5 474 aa12.89□□□□□ -0.35
RPUSD4-201ENST00000298317 RPS10-NUDT3A0A1W2PQS6 291 aa12.89□□□□□ -0.35
RPUSD4-201ENST00000298317 SMIM30A4D0T7 59 aa12.89□□□□□ -0.35
RPUSD4-201ENST00000298317 H3BNC9 293 aa12.89□□□□□ -0.35
RPUSD4-201ENST00000298317 STK25O00506 426 aa12.89□□□□□ -0.35
RPUSD4-201ENST00000298317 CHP2O43745 196 aa12.89□□□□□ -0.35
RPUSD4-201ENST00000298317 PRAMEF10O60809 474 aa12.89□□□□□ -0.35
RPUSD4-201ENST00000298317 RAF1P04049 648 aa12.89□□□□□ -0.35
RPUSD4-201ENST00000298317 ETFAP13804 333 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms