RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 TBC1D20Q96BZ9 403 aa14.29□□□□□ -0.12
PDE6D-201ENST00000287600 CCDC120Q96HB5 630 aa14.29□□□□□ -0.12
PDE6D-201ENST00000287600 NSUN5Q96P11 429 aaKnown RBP14.29□□□□□ -0.12
PDE6D-201ENST00000287600 CDK15Q96Q40 435 aa14.29□□□□□ -0.12
PDE6D-201ENST00000287600 RUBCNLQ9H714 662 aa14.29□□□□□ -0.12
PDE6D-201ENST00000287600 CLK4Q9HAZ1 481 aaKnown RBP14.29□□□□□ -0.12
PDE6D-201ENST00000287600 SEMA4BQ9NPR2 832 aaPredicted RBP14.29□□□□□ -0.12
PDE6D-201ENST00000287600 STMN3Q9NZ72 180 aa14.29□□□□□ -0.12
PDE6D-201ENST00000287600 RAB21Q9UL25 225 aa14.29□□□□□ -0.12
PDE6D-201ENST00000287600 CENPEQ02224 2701 aa14.29□□□□□ -0.12
PDE6D-201ENST00000287600 CELSR2Q9HCU4 2923 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 A0A088AWK7 358 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 H0YIV9 168 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 UGDHO60701 494 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 B4GALT2O60909 372 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 GLRA3O75311 464 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 TGFB1P01137 390 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 TUBBP07437 444 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 FHP07954 510 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 CYC1P08574 325 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 RPS17P08708 135 aaKnown RBP14.28□□□□□ -0.12
PDE6D-201ENST00000287600 KRT4P19013 534 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 ZNF10P21506 573 aaPredicted RBP14.28□□□□□ -0.12
PDE6D-201ENST00000287600 ATP5F1P24539 256 aaPredicted RBP14.28□□□□□ -0.12
PDE6D-201ENST00000287600 SERPINB1P30740 379 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 CCT5P48643 541 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 CDH13P55290 713 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 TGM3Q08188 693 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 ART3Q13508 389 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 ZNF766Q5HY98 468 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 FCRLBQ6BAA4 426 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 MTFR2Q6P444 385 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 ABHD17CQ6PCB6 329 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 CHSY3Q70JA7 882 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 RPS27LQ71UM5 84 aaKnown RBP14.28□□□□□ -0.12
PDE6D-201ENST00000287600 BEST3Q8N1M1 668 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 RNF175Q8N4F7 328 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 L3MBTL4Q8NA19 623 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 HUS1BQ8NHY5 278 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 ZNF483Q8TF39 744 aaPredicted RBP14.28□□□□□ -0.12
PDE6D-201ENST00000287600 ITLN2Q8WWU7 325 aaPredicted RBP14.28□□□□□ -0.12
PDE6D-201ENST00000287600 REPS1Q96D71 796 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 CMTM7Q96FZ5 175 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 OR1F2PQ96R84 312 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 MS4A8Q9BY19 250 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 ZBTB26Q9HCK0 441 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 LANCL2Q9NS86 450 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 ADGRE2Q9UHX3 823 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 PCDHGA11Q9Y5H2 935 aa14.28□□□□□ -0.12
PDE6D-201ENST00000287600 KLF2Q9Y5W3 355 aaPredicted RBP14.28□□□□□ -0.12
PDE6D-201ENST00000287600 SCN2AQ99250 2005 aa14.27□□□□□ -0.12
PDE6D-201ENST00000287600 CSMD1Q96PZ7 3565 aa14.27□□□□□ -0.12
PDE6D-201ENST00000287600 PSMD12O00232 456 aaPredicted RBP14.27□□□□□ -0.13
PDE6D-201ENST00000287600 SAP18O00422 153 aaKnown RBP14.27□□□□□ -0.13
PDE6D-201ENST00000287600 COPEO14579 308 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 B3GALT2O43825 422 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 SUPT7LO94864 414 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 RNH1P13489 461 aaKnown RBP14.27□□□□□ -0.13
PDE6D-201ENST00000287600 TSPAN8P19075 237 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 JAK1P23458 1154 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 GRNP28799 593 aaKnown RBP14.27□□□□□ -0.13
PDE6D-201ENST00000287600 CRHR1P34998 444 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 PIK3CBP42338 1070 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 CA7P43166 264 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 NEK2P51955 445 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 MTTPP55157 894 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 CASP6P55212 293 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 HERVK_113P63132 956 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 RUNX2Q13950 521 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.27□□□□□ -0.13
PDE6D-201ENST00000287600 TMEM35AQ53FP2 167 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 PLAG1Q6DJT9 500 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 MILR1Q7Z6M3 343 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 ANKRD37Q7Z713 158 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 MRGPRGQ86SM5 289 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 C4orf33Q8N1A6 199 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 CA13Q8N1Q1 262 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 RIBC1Q8N443 379 aaPredicted RBP14.27□□□□□ -0.13
PDE6D-201ENST00000287600 MREGQ8N565 214 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 SRFBP1Q8NEF9 429 aaKnown RBP14.27□□□□□ -0.13
PDE6D-201ENST00000287600 ZNF354BQ96LW1 612 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 QRFPRQ96P65 431 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 MTERF1Q99551 399 aaKnown RBP14.27□□□□□ -0.13
PDE6D-201ENST00000287600 NTMT1Q9BV86 223 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 C1QTNF3Q9BXJ4 246 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 ERVK-6Q9BXR3 956 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 ROPN1BQ9BZX4 212 aaPredicted RBP14.27□□□□□ -0.13
PDE6D-201ENST00000287600 OR51B5Q9H339 312 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 COPS7BQ9H9Q2 264 aaPredicted RBP14.27□□□□□ -0.13
PDE6D-201ENST00000287600 ROPN1Q9HAT0 212 aaPredicted RBP14.27□□□□□ -0.13
PDE6D-201ENST00000287600 KCNK13Q9HB14 408 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 EMCNQ9ULC0 261 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 GRID1Q9ULK0 1009 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 MYO7BQ6PIF6 2116 aa14.27□□□□□ -0.13
PDE6D-201ENST00000287600 SCN3AQ9NY46 2000 aa14.26□□□□□ -0.13
PDE6D-201ENST00000287600 FAM227AF5H4B4 570 aa14.26□□□□□ -0.13
PDE6D-201ENST00000287600 RTCAO00442 366 aaKnown RBP14.26□□□□□ -0.13
PDE6D-201ENST00000287600 PPP6CO00743 305 aa14.26□□□□□ -0.13
PDE6D-201ENST00000287600 OTCP00480 354 aa14.26□□□□□ -0.13
PDE6D-201ENST00000287600 IMPDH1P20839 514 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms