RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 PAPOLBQ9NRJ5 636 aaKnown RBP17.06■□□□□ 0.32
CAPN1-201ENST00000279247 SLCO1B1Q9Y6L6 691 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 FEN1P39748 380 aaKnown RBP17.05■□□□□ 0.32
CAPN1-201ENST00000279247 DGKEP52429 567 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 IL5RAQ01344 420 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 HORMAD2Q8N7B1 307 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 OR5D16Q8NGK9 328 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 CREB3L4Q8TEY5 395 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 TRIM4Q9C037 500 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 THUMPD1Q9NXG2 353 aaKnown RBP17.05■□□□□ 0.32
CAPN1-201ENST00000279247 TRPC4Q9UBN4 977 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 A0A0J9YVX5 310 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 SMIM31A0A1B0GVY4 71 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 PGRMC2O15173 223 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 TNFRSF21O75509 655 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 C9P02748 559 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 EIF2S1P05198 315 aaKnown RBP17.05■□□□□ 0.32
CAPN1-201ENST00000279247 CHRM5P08912 532 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-201ENST00000279247 SRP54P61011 504 aaKnown RBP17.05■□□□□ 0.32
CAPN1-201ENST00000279247 KCNJ10P78508 379 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 MRPS21P82921 87 aaKnown RBP17.05■□□□□ 0.32
CAPN1-201ENST00000279247 VEZF1Q14119 521 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 ALG11Q2TAA5 492 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 EOGTQ5NDL2 527 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 C18orf63Q68DL7 685 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 DGCR14Q96DF8 476 aaKnown RBP17.05■□□□□ 0.32
CAPN1-201ENST00000279247 GPR174Q9BXC1 333 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 C8orf4Q9NR00 106 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 C1GALT1Q9NS00 363 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 TMEFF2Q9UIK5 374 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-201ENST00000279247 C3orf18Q9UK00 162 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 ABCA7Q8IZY2 2146 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 TEAD1P28347 426 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 PCGF2P35227 344 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 PPM1FP49593 454 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-201ENST00000279247 DAPP51397 102 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 HIPK1Q86Z02 1210 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 CNIH3Q8TBE1 160 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 POLR1BQ9H9Y6 1135 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 ATG4BQ9Y4P1 393 aa17.05■□□□□ 0.32
CAPN1-201ENST00000279247 LOC100130705A0A1B0GUX0 176 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 ZW10O43264 779 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 C7P10643 843 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 POU2F1P14859 743 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 PVRP15151 417 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 IL9P15248 144 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 CMPK1P30085 196 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 DSTNP60981 165 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 USP30Q70CQ3 517 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 CCDC116Q8IYX3 515 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 TOE1Q96GM8 510 aaKnown RBP17.04■□□□□ 0.32
CAPN1-201ENST00000279247 DOHHQ9BU89 302 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 CCDC90BQ9GZT6 254 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 SIRT5Q9NXA8 310 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 CA14Q9ULX7 337 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 A0A087WXM4 84 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 C5orf58C9J3I9 102 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 SEMA3DO95025 777 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 MAGEA2P43356 314 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 CLCN2P51788 898 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 CDH12P55289 794 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 Q6ZPB1 254 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-201ENST00000279247 USP51Q70EK9 711 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 IKBIPQ70UQ0 350 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 THAP5Q7Z6K1 395 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 LSRQ86X29 649 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-201ENST00000279247 BPIFB6Q8NFQ5 453 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 XAGE5Q8WWM1 108 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 BBS4Q96RK4 519 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 TM9SF3Q9HD45 589 aa17.04■□□□□ 0.32
CAPN1-201ENST00000279247 KLHL33A6NCF5 533 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 NCBP2P52298 156 aaKnown RBP eCLIP17.03■□□□□ 0.322e-8■□□□□ 10.4
CAPN1-201ENST00000279247 RAD23AP54725 363 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 RAPSNQ13702 412 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 SLC9A5Q14940 896 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 CTU2Q2VPK5 515 aaKnown RBP17.03■□□□□ 0.32
CAPN1-201ENST00000279247 TTC23Q5W5X9 447 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 C6orf120Q7Z4R8 191 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 TMEFF1Q8IYR6 380 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 ACOT4Q8N9L9 421 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 MS4A6EQ96DS6 147 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 QRFPRQ96P65 431 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 RAB11FIP5Q9BXF6 653 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 C8orf33Q9H7E9 229 aaPredicted RBP17.03■□□□□ 0.32
CAPN1-201ENST00000279247 EQTNQ9NQ60 294 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 RASSF1Q9NS23 344 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 TMEM184CQ9NVA4 438 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 MMP17Q9ULZ9 603 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 SCML1Q9UN30 329 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 TRBC2A0A5B9 178 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 OR6C74A6NCV1 312 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 ZNF860A6NHJ4 632 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 B4GALT2O60909 372 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 KRT75O95678 551 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 AKT2P31751 481 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 SELENOWP63302 87 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 BTN3A2P78410 334 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 SPIBQ01892 262 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 CD47Q08722 323 aa17.03■□□□□ 0.32
CAPN1-201ENST00000279247 CCINQ13939 588 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms