RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 PYURFQ96I23 114 aa8.87□□□□□ -0.99
SSR3-201ENST00000265044 COL21A1Q96P44 957 aa8.87□□□□□ -0.99
SSR3-201ENST00000265044 KAT8Q9H7Z6 458 aaKnown RBP8.87□□□□□ -0.99
SSR3-201ENST00000265044 TESMINQ9Y4I5 508 aa8.87□□□□□ -0.99
SSR3-201ENST00000265044 C1orf226A1L170 272 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 RNASET2O00584 256 aaKnown RBP8.86□□□□□ -0.99
SSR3-201ENST00000265044 CLDN4O14493 209 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 ANKRD28O15084 1053 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 DYRK3O43781 588 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 NOBOXO60393 691 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 UBXN7O94888 489 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 FURINP09958 794 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 NUDT7P0C024 238 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 HOXB3P14651 431 aaPredicted RBP8.86□□□□□ -0.99
SSR3-201ENST00000265044 RRM2P31350 389 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 AHRP35869 848 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 RPS9P46781 194 aaKnown RBP8.86□□□□□ -0.99
SSR3-201ENST00000265044 OR1E2P47887 323 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 FZD2Q14332 565 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 MSANTD1Q6ZTZ1 278 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 IKBIPQ70UQ0 350 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 C6orf120Q7Z4R8 191 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 GALNT5Q7Z7M9 940 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 HMGN2P46Q86SG4 172 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 CYP4Z1Q86W10 505 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 CAMKK1Q8N5S9 505 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 NATD1Q8N6N6 113 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 UTP15Q8TED0 518 aaKnown RBP8.86□□□□□ -0.99
SSR3-201ENST00000265044 TMBIM1Q969X1 311 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 ZNF570Q96NI8 536 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 OSBPL11Q9BXB4 747 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 PITHD1Q9GZP4 211 aaPredicted RBP8.86□□□□□ -0.99
SSR3-201ENST00000265044 PAIP1Q9H074 479 aaKnown RBP8.86□□□□□ -0.99
SSR3-201ENST00000265044 BATF3Q9NR55 127 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 SLC25A37Q9NYZ2 338 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 LRIT1Q9P2V4 623 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 ABCD2Q9UBJ2 740 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 PHF11Q9UIL8 331 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 PRUNE2Q8WUY3 3088 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 AHCTF1Q8WYP5 2266 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 A0A0J9YY10 115 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 LRIT2A6NDA9 550 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 H0YGG7 62 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 YY2O15391 372 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 CYP4B1P13584 511 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 DRD2P14416 443 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 PRKACGP22612 351 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 UQCRC2P22695 453 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 TPP2P29144 1249 aaPredicted RBP8.86□□□□□ -0.99
SSR3-201ENST00000265044 ARF3P61204 181 aaPredicted RBP8.86□□□□□ -0.99
SSR3-201ENST00000265044 IL5RAQ01344 420 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 RGNQ15493 299 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 SLC5A12Q1EHB4 618 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 VTCN1Q7Z7D3 282 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 GATAD2AQ86YP4 633 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 UBALD2Q8IYN6 164 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 OR4K14Q8NGD5 310 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 PHF10Q8WUB8 498 aaKnown RBP8.86□□□□□ -0.99
SSR3-201ENST00000265044 MTERF3Q96E29 417 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 MMABQ96EY8 250 aaPredicted RBP8.86□□□□□ -0.99
SSR3-201ENST00000265044 TM9SF3Q9HD45 589 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 PDE7BQ9NP56 450 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 CTPS2Q9NRF8 586 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 USP36Q9P275 1121 aaKnown RBP8.86□□□□□ -0.99
SSR3-201ENST00000265044 BTNL2Q9UIR0 455 aa8.86□□□□□ -0.99
SSR3-201ENST00000265044 CNOT1A5YKK6 2376 aaKnown RBP8.86□□□□□ -0.99
SSR3-201ENST00000265044 RIF1Q5UIP0 2472 aaKnown RBP8.86□□□□□ -0.99
SSR3-201ENST00000265044 CACNA1HO95180 2353 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 TOR1BO14657 336 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 PDE9AO76083 593 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 PGDP52209 483 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 IST1P53990 364 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 TMEM107Q6UX40 140 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 DGLUCYQ7Z3D6 616 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 ARL14Q8N4G2 192 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 TM4SF18Q96CE8 201 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 ZDHHC12Q96GR4 267 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 HSH2DQ96JZ2 352 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 CNPPD1Q9BV87 410 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 TMEM121BQ9BXQ6 578 aaPredicted RBP8.85□□□□□ -0.99
SSR3-201ENST00000265044 WASH6PQ9NQA3 447 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 SLC6A13Q9NSD5 602 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 EXD2Q9NVH0 621 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 PDP1Q9P0J1 537 aaPredicted RBP8.85□□□□□ -0.99
SSR3-201ENST00000265044 DNAJB9Q9UBS3 223 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 C3orf18Q9UK00 162 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 GBF1Q92538 1859 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 TCRBV3S1A0A5B6 114 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 WASHC1A8K0Z3 465 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 FAM220BPB1ANY3 271 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 ZSCAN9O15535 394 aaPredicted RBP8.85□□□□□ -0.99
SSR3-201ENST00000265044 TMPRSS11DO60235 418 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 OR12D1P0DN82 309 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 HPGDP15428 266 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 HYAL2Q12891 473 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 WASH2PQ6VEQ5 465 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 ABI3BPQ7Z7G0 1075 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 NRROSQ86YC3 692 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 PDSS2Q86YH6 399 aa8.85□□□□□ -0.99
SSR3-201ENST00000265044 SAMD14Q8IZD0 417 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms