RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 PRAMEF10O60809 474 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 WBP4O75554 376 aaKnown RBP4.54□□□□□ -1.68
USP44-201ENST00000258499 PDE9AO76083 593 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 ADH1AP07327 375 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 IGFBP1P08833 259 aaPredicted RBP4.54□□□□□ -1.68
USP44-201ENST00000258499 MPC1LP0DKB6 136 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 CD72P21854 359 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 PTX3P26022 381 aaPredicted RBP4.54□□□□□ -1.68
USP44-201ENST00000258499 NTSP30990 170 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 AVPR1BP47901 424 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 DGKGP49619 791 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 B4GALNT1Q00973 533 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 TLE2Q04725 743 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 NFE2L1Q14494 772 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 LASP1Q14847 261 aaKnown RBP4.54□□□□□ -1.68
USP44-201ENST00000258499 ARHGEF6Q15052 776 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 TEAD2Q15562 447 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 TBCEQ15813 527 aaPredicted RBP4.54□□□□□ -1.68
USP44-201ENST00000258499 ATAT1Q5SQI0 421 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 SMARCD3Q6STE5 483 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 CCDC149Q6ZUS6 474 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 NEK10Q6ZWH5 1172 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 KRT74Q7RTS7 529 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 NRARPQ7Z6K4 114 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.54□□□□□ -1.68
USP44-201ENST00000258499 GALNT12Q8IXK2 581 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 GHDCQ8N2G8 530 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 CBARPQ8N350 705 aaPredicted RBP4.54□□□□□ -1.68
USP44-201ENST00000258499 L3MBTL4Q8NA19 623 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 OR52N2Q8NGI0 321 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 FIBINQ8TAL6 211 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 SLC5A11Q8WWX8 675 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 SLC9A6Q92581 669 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 RAD51AP1Q96B01 352 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 VMP1Q96GC9 406 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 EPYCQ99645 322 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 AIF1LQ9BQI0 150 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 TMED9Q9BVK6 235 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 SLIRPQ9GZT3 109 aaKnown RBP4.54□□□□□ -1.68
USP44-201ENST00000258499 RHBGQ9H310 441 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 RETREG1Q9H6L5 497 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 SMURF1Q9HCE7 757 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 PAQR5Q9NXK6 330 aaPredicted RBP4.54□□□□□ -1.68
USP44-201ENST00000258499 ZNF624Q9P2J8 865 aaPredicted RBP4.54□□□□□ -1.68
USP44-201ENST00000258499 FBXW2Q9UKT8 454 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 ERVW-1Q9UQF0 538 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 ENTPD4Q9Y227 616 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 RPL36Q9Y3U8 105 aaKnown RBP4.54□□□□□ -1.68
USP44-201ENST00000258499 BACE2Q9Y5Z0 518 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 CLCA3PQ9Y6N3 262 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 ENPP4Q9Y6X5 453 aa4.54□□□□□ -1.68
USP44-201ENST00000258499 METTL15A6NJ78 407 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 CLDN24A6NM45 220 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 M0R3H8 397 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 GAPDHSO14556 408 aaPredicted RBP4.53□□□□□ -1.68
USP44-201ENST00000258499 ARHGAP33O14559 1287 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 SLC30A4O14863 429 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 PI15O43692 258 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 GASTP01350 101 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 PCCBP05166 539 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 SLC35G4P0C7Q5 338 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 C1GALT1C1LP0DN25 315 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 OR12D1P0DN82 309 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 IDSP22304 550 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 CHMP24386 653 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 TNFSF8P32971 234 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 PCGF2P35227 344 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 TALDO1P37837 337 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 TGM4P49221 684 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 CRISP3P54108 245 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 SMIM11AP58511 58 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 KCNC4Q03721 635 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 GBX1Q14549 363 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 GINS1Q14691 196 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 TRIM71Q2Q1W2 868 aaKnown RBP4.53□□□□□ -1.68
USP44-201ENST00000258499 FAM214AQ32MH5 1076 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 DDI2Q5TDH0 399 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 FRMPD2BQ6IN97 320 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 GRHL2Q6ISB3 625 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 LAIR2Q6ISS4 152 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 PNCKQ6P2M8 343 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 TUBA3EQ6PEY2 450 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 GAREM2Q75VX8 874 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 ZNF367Q7RTV3 350 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 C16orf62Q7Z3J2 963 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 SLC46A3Q7Z3Q1 461 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 LHFPL3Q86UP9 236 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 IQCHQ86VS3 1027 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 CALHM3Q86XJ0 350 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 RASGEF1AQ8N9B8 481 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 DENND6BQ8NEG7 585 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 OR8J2Q8NGG1 315 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 GPR151Q8TDV0 419 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 CXorf40AQ8TE69 158 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 C16orf78Q8WTQ4 265 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 UBTD2Q8WUN7 234 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 ZNF480Q8WV37 535 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 BTN2A2Q8WVV5 523 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 YIPF6Q96EC8 236 aa4.53□□□□□ -1.68
USP44-201ENST00000258499 TMEM19Q96HH6 336 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms