RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 GYS2P54840 703 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 HSD17B7P56937 341 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 C21orf58P58505 322 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 RHAGQ02094 409 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 GALNTL6Q49A17 601 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 VWA2Q5GFL6 755 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 VWA5B1Q5TIE3 1220 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 MLIPQ5VWP3 458 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 CGB2Q6NT52 195 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 PROSER1Q86XN7 944 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 FNDC5Q8NAU1 212 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 KDF1Q8NAX2 398 aaPredicted RBP13.29□□□□□ -0.28
VPS25-201ENST00000253794 PLPP5Q8NEB5 264 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 C7orf57Q8NEG2 295 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 CEP70Q8NHQ1 597 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 C16orf78Q8WTQ4 265 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 KIAA1143Q96AT1 154 aaPredicted RBP13.29□□□□□ -0.28
VPS25-201ENST00000253794 PEX11GQ96HA9 241 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 SLC45A3Q96JT2 553 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 CSF3RQ99062 836 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 CCDC28BQ9BUN5 200 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 TRIM55Q9BYV6 548 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 WDR55Q9H6Y2 383 aaPredicted RBP13.29□□□□□ -0.28
VPS25-201ENST00000253794 GPN2Q9H9Y4 310 aaPredicted RBP13.29□□□□□ -0.28
VPS25-201ENST00000253794 KCNK13Q9HB14 408 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 TEX10Q9NXF1 929 aaPredicted RBP13.29□□□□□ -0.28
VPS25-201ENST00000253794 GIMAP2Q9UG22 337 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 MRPS33Q9Y291 106 aaKnown RBP13.29□□□□□ -0.28
VPS25-201ENST00000253794 POLR3HQ9Y535 204 aaPredicted RBP13.29□□□□□ -0.28
VPS25-201ENST00000253794 CLDN16Q9Y5I7 305 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 DMXL2Q8TDJ6 3036 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 CELSR3Q9NYQ7 3312 aa13.29□□□□□ -0.28
VPS25-201ENST00000253794 ACACAQ13085 2346 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 NUP210LQ5VU65 1888 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 IGKV3D-11A0A0A0MRZ8 115 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 GNG14A0A1W2PPG7 69 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 C1orf226A1L170 272 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 TBX19O60806 448 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 AIFM1O95831 613 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 IGHEP01854 428 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 UMODP07911 640 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 TROVE2P10155 538 aaKnown RBP eCLIP13.28□□□□□ -0.28
VPS25-201ENST00000253794 NR2F6P10588 404 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 LIFP15018 202 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 CPN2P22792 545 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 TLX1P31314 330 aaPredicted RBP13.28□□□□□ -0.28
VPS25-201ENST00000253794 ASMTP46597 345 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 MRPL19P49406 292 aaKnown RBP13.28□□□□□ -0.28
VPS25-201ENST00000253794 IDH3AP50213 366 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 EFNA3P52797 238 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 AQP5P55064 265 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 IRX1P78414 480 aaPredicted RBP13.28□□□□□ -0.28
VPS25-201ENST00000253794 IGLV3-21P80748 117 aaPredicted RBP13.28□□□□□ -0.28
VPS25-201ENST00000253794 KLC1Q07866 573 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 NDUFAF5Q5TEU4 345 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 FAM71E1Q6IPT2 247 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 SPATA19Q7Z5L4 167 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 FAM9CQ8IZT9 166 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 TMEM52Q8NDY8 209 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 TANKQ92844 425 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 OR52B2Q96RD2 323 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 VN1R1Q9GZP7 353 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 ACTL8Q9H568 366 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 RPF2Q9H7B2 306 aaKnown RBP13.28□□□□□ -0.28
VPS25-201ENST00000253794 SEMA3GQ9NS98 782 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 NOP53Q9NZM5 478 aaKnown RBP13.28□□□□□ -0.28
VPS25-201ENST00000253794 EHD3Q9NZN3 535 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 FBXW2Q9UKT8 454 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 CES1P1Q9UKY3 287 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 PCDHA9Q9Y5H5 950 aa13.28□□□□□ -0.28
VPS25-201ENST00000253794 SCN3AQ9NY46 2000 aa13.27□□□□□ -0.28
VPS25-201ENST00000253794 IDSB3KWA1 339 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 FAM227AF5H4B4 570 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 CLDN4O14493 209 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 SHOX2O60902 331 aaPredicted RBP13.27□□□□□ -0.29
VPS25-201ENST00000253794 CTNSO60931 367 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 JRKO75564 520 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 TACR1P25103 407 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 PPP2R1BP30154 601 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 FOLR3P41439 243 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 HNRNPFP52597 415 aaKnown RBP13.27□□□□□ -0.29
VPS25-201ENST00000253794 TAS2R50P59544 299 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 BIKQ13323 160 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 SSPNQ14714 243 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 HEPACAMQ14CZ8 416 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 LSM12Q3MHD2 195 aaKnown RBP13.27□□□□□ -0.29
VPS25-201ENST00000253794 IL23RQ5VWK5 629 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 OR52E8Q6IFG1 317 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 SLC48A1Q6P1K1 146 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 TMEM205Q6UW68 189 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 ACAD11Q709F0 780 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 LAPTM4BQ86VI4 370 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 EFCAB3Q8N7B9 438 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 RFWD2Q8NHY2 731 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 DNAJB14Q8TBM8 379 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 ADAMTS17Q8TE56 1095 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 PPP1R36Q96LQ0 422 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 EBF4Q9BQW3 602 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 FAIM2Q9BWQ8 316 aa13.27□□□□□ -0.29
VPS25-201ENST00000253794 EBPLQ9BY08 206 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms