RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 MICAQ29983 383 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 PLAG1Q6DJT9 500 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 PDE12Q6L8Q7 609 aaKnown RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 CREB3L2Q70SY1 520 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 ZBTB46Q86UZ6 589 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SLITRK4Q8IW52 837 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 CCDC36Q8IYA8 594 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 UBQLNLQ8IYU4 475 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 FAM86B1Q8N7N1 296 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 L3MBTL4Q8NA19 623 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 ASB15Q8WXK1 588 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 AKAP1Q92667 903 aaKnown RBP eCLIP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 EXOC2Q96KP1 924 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 ERMAPQ96PL5 475 aaPredicted RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 CDCA4Q9BXL8 241 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 BTBD1Q9H0C5 482 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 RNF121Q9H920 327 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 GPN1Q9HCN4 374 aaPredicted RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 THSD1Q9NS62 852 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SRRDQ9UH36 339 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 TBX21Q9UL17 535 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 OGDHLQ9ULD0 1010 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 RBMX2Q9Y388 322 aaKnown RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 COL5A1P20908 1838 aaPredicted RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 IQCMA0A1B0GVH7 501 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 C1orf226A1L170 272 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 PRAMEF25A6NGN4 478 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 TUBAL3A6NHL2 446 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 LOC730098B7Z3J9 87 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 FOXD2O60548 495 aaPredicted RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 TNFRSF21O75509 655 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 CFIP05156 583 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 CTSHP09668 335 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SLC2A2P11168 524 aaPredicted RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 MYCLP1P12525 358 aaPredicted RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 GPX2P18283 190 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 ITGB6P18564 788 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 CD22P20273 847 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 CD247P20963 164 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 AGXTP21549 392 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 CPN2P22792 545 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 THPOP40225 353 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 AGTR2P50052 363 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SMSP52788 366 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 CRISP1P54107 249 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 EEF1A2Q05639 463 aaKnown RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 CHIT1Q13231 466 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 ASAH1Q13510 395 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SPHARQ15513 63 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SNAP47Q5SQN1 464 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 ASTLQ6HA08 431 aaPredicted RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 NOXRED1Q6NXP6 359 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 CDK20Q8IZL9 346 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 CAMKK1Q8N5S9 505 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 TMIEQ8NEW7 156 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 PROKR2Q8NFJ6 384 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 OR52B6Q8NGF0 335 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 OR8J2Q8NGG1 315 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 OR52N2Q8NGI0 321 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SLC35B4Q969S0 331 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 WDFY2Q96P53 400 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 FUZQ9BT04 418 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 MENTQ9BUN1 341 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 FNDC11Q9BVV2 318 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 AMBRA1Q9C0C7 1298 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 MKRN2Q9H000 416 aaKnown RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 PCBD2Q9H0N5 130 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 ZNF334Q9HCZ1 680 aaPredicted RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 ITM2CQ9NQX7 267 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 PCDHGB7Q9Y5F8 929 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 HNRNPCL2B2RXH8 293 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 TMX2-CTNND1H3BSU7 103 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 ARVCFO00192 962 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 KPNA3O00505 521 aaPredicted RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SLC28A2O43868 658 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 OR10H3O60404 316 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 AOC2O75106 756 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 ZNF30P17039 623 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 LHCGRP22888 699 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 DGKGP49619 791 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SELENOWP63302 87 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SLC14A1Q13336 389 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 ABRAXAS2Q15018 415 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SUZ12Q15022 739 aaKnown RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SF3A2Q15428 464 aaKnown RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 WSCD2Q2TBF2 565 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 ZNF648Q5T619 568 aaPredicted RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 STEAP3Q658P3 488 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 FUT10Q6P4F1 479 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 FAHD1Q6P587 224 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 SUSD1Q6UWL2 747 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 USP30Q70CQ3 517 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 TMEM179BQ7Z7N9 219 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 GATAD2AQ86YP4 633 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 TCEAL8Q8IYN2 117 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 DCAF4L2Q8NA75 395 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 HASPINQ8TF76 798 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 RPL3LQ92901 407 aaKnown RBP3.97□□□□□ -1.77
UBE4A-201ENST00000252108 B3GALT6Q96L58 329 aa3.97□□□□□ -1.77
UBE4A-201ENST00000252108 MRGPRX3Q96LB0 322 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms