RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 TNK1Q13470 666 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 PTGES3Q15185 160 aaKnown RBP13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 ACSM2BQ68CK6 577 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 RFLNAQ6ZTI6 216 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 ADGRD2Q7Z7M1 963 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 IFNL1Q8IU54 200 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 CELF5Q8N6W0 485 aaKnown RBP13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 BCL7CQ8WUZ0 217 aaPredicted RBP13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 PKP4Q99569 1192 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 GABARAPL1Q9H0R8 117 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 IFT22Q9H7X7 185 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 SPATA6Q9NWH7 488 aaPredicted RBP13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 DIMT1Q9UNQ2 313 aaKnown RBP13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 TRAV6A0A075B6T7 132 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 RFXAPO00287 272 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 SYN3O14994 580 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 PRPS2P11908 318 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 PSMA1P25786 263 aaKnown RBP13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 SOAT1P35610 550 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 RRAS2P62070 204 aaPredicted RBP13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 KCNJ10P78508 379 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 GRB14Q14449 540 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 FBXO43Q4G163 708 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 TOR1AIP1Q5JTV8 583 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 FAHD1Q6P587 224 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 ASB18Q6ZVZ8 466 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 TSPAN33Q86UF1 283 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 RDH10Q8IZV5 341 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 OR10Z1Q8NGY1 313 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 SLC32A1Q9H598 525 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 IL26Q9NPH9 171 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 HCSTQ9UBK5 93 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 CYB5R1Q9UHQ9 305 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 PPIEQ9UNP9 301 aaKnown RBP13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 CFAP20Q9Y6A4 193 aaKnown RBP13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 V9GYH0 126 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 FNDC1Q4ZHG4 1894 aaPredicted RBP13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 SH3BP5O60239 455 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 TPST2O60704 377 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 CYP17A1P05093 508 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 ARSBP15848 533 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 ZNF30P17039 623 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 SLC11A2P49281 568 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 PURAQ00577 322 aaKnown RBP13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 GRK1Q15835 563 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 COX20Q5RI15 118 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 SERPINA11Q86U17 422 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 Q8N402 240 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 AQP11Q8NBQ7 271 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 SLC5A11Q8WWX8 675 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 BRI3BPQ8WY22 251 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 USP7Q93009 1102 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 C7orf34Q96L11 122 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 DUSP26Q9BV47 211 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 BARHL1Q9BZE3 327 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 POLR2J2Q9GZM3 115 aaKnown RBP13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 NDUFAF4Q9P032 175 aa13.55□□□□□ -0.24
PCDHB3-201ENST00000231130 IFNA7P01567 189 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 ALPPP05187 535 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 NUP62P37198 522 aaPredicted RBP13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 EPHA5P54756 1037 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 NFATC2Q13469 925 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 FCN2Q15485 313 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 XKR6Q5GH73 641 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 TMIGD1Q6UXZ0 262 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 FAM92BQ6ZTR7 304 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 PIH1D2Q8WWB5 315 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 RBPMSQ93062 196 aaKnown RBP13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 TMEM45AQ9NWC5 275 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 TRPS1Q9UHF7 1281 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 PCDHB1Q9Y5F3 818 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 MGAT4DA6NG13 374 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 ATG13O75143 517 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 EPORP19235 508 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 SDHBP21912 280 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 CDC42P60953 191 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 SSX1Q16384 188 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 ZXDCQ2QGD7 858 aaPredicted RBP13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 IER5LQ5T953 404 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 FRG2Q64ET8 278 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 DNAJC5GQ8N7S2 189 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 OR52E4Q8NGH9 312 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 OR4A15Q8NGL6 344 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 NFKBIDQ8NI38 313 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 RADILQ96JH8 1075 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 FRG2BQ96QU4 278 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 SIGLEC11Q96RL6 698 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 SMAD5Q99717 465 aaKnown RBP13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 SEC22CQ9BRL7 303 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 NTMT1Q9BV86 223 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 SPNS1Q9H2V7 528 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 TMEM161AQ9NX61 479 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 MBD1Q9UIS9 605 aaPredicted RBP13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 GREB1Q4ZG55 1949 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 KDELR3O43731 214 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 PPM1BO75688 479 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 RPL17P18621 184 aaKnown RBP13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 HLA-DMAP28067 261 aa13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 CORO1AP31146 461 aaKnown RBP13.54□□□□□ -0.24
PCDHB3-201ENST00000231130 CRYBA2P53672 197 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms