RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 CXorf36Q9H7Y0 433 aa15.53■□□□□ 0.08
LTBR-201ENST00000228918 NMNAT1Q9HAN9 279 aaPredicted RBP15.53■□□□□ 0.08
LTBR-201ENST00000228918 CCDC177Q9NQR7 707 aaPredicted RBP15.53■□□□□ 0.08
LTBR-201ENST00000228918 SPINT1O43278 529 aa15.52■□□□□ 0.08
LTBR-201ENST00000228918 MPZL2O60487 215 aa15.52■□□□□ 0.08
LTBR-201ENST00000228918 GASTP01350 101 aa15.52■□□□□ 0.08
LTBR-201ENST00000228918 HSMCR30P0CW71 290 aa15.52■□□□□ 0.08
LTBR-201ENST00000228918 WDR5P61964 334 aaKnown RBP15.52■□□□□ 0.08
LTBR-201ENST00000228918 DUSP7Q16829 419 aa15.52■□□□□ 0.08
LTBR-201ENST00000228918 C19orf48Q6RUI8 117 aa15.52■□□□□ 0.08
LTBR-201ENST00000228918 PARP16Q8N5Y8 322 aa15.52■□□□□ 0.08
LTBR-201ENST00000228918 POC5Q8NA72 575 aa15.52■□□□□ 0.08
LTBR-201ENST00000228918 APOBEC4Q8WW27 367 aaKnown RBP15.52■□□□□ 0.08
LTBR-201ENST00000228918 Q96MT0 163 aa15.52■□□□□ 0.08
LTBR-201ENST00000228918 TOX2Q96NM4 488 aa15.52■□□□□ 0.08
LTBR-201ENST00000228918 OR5M11Q96RB7 305 aa15.52■□□□□ 0.08
LTBR-201ENST00000228918 KLHL25Q9H0H3 589 aa15.52■□□□□ 0.08
LTBR-201ENST00000228918 MIEF1Q9NQG6 463 aa15.52■□□□□ 0.08
LTBR-201ENST00000228918 MARK1Q9P0L2 795 aa15.52■□□□□ 0.08
LTBR-201ENST00000228918 RHCGQ9UBD6 479 aa15.52■□□□□ 0.08
LTBR-201ENST00000228918 OGDHLQ9ULD0 1010 aa15.52■□□□□ 0.08
LTBR-201ENST00000228918 WNT6Q9Y6F9 365 aa15.52■□□□□ 0.08
LTBR-201ENST00000228918 K7ESM1 405 aa15.52■□□□□ 0.07
LTBR-201ENST00000228918 ZW10O43264 779 aa15.52■□□□□ 0.07
LTBR-201ENST00000228918 CXCL14O95715 111 aa15.52■□□□□ 0.07
LTBR-201ENST00000228918 UQCRC2P22695 453 aa15.52■□□□□ 0.07
LTBR-201ENST00000228918 SEPHS1P49903 392 aa15.52■□□□□ 0.07
LTBR-201ENST00000228918 CRISP1P54107 249 aa15.52■□□□□ 0.07
LTBR-201ENST00000228918 EPHA5P54756 1037 aa15.52■□□□□ 0.07
LTBR-201ENST00000228918 REEP3Q6NUK4 255 aa15.52■□□□□ 0.07
LTBR-201ENST00000228918 TAGAPQ8N103 731 aa15.52■□□□□ 0.07
LTBR-201ENST00000228918 YME1L1Q96TA2 773 aa15.52■□□□□ 0.07
LTBR-201ENST00000228918 SORBS1Q9BX66 1292 aaKnown RBP15.52■□□□□ 0.07
LTBR-201ENST00000228918 ZCCHC2Q9C0B9 1178 aaKnown RBP15.52■□□□□ 0.07
LTBR-201ENST00000228918 TBC1D14Q9P2M4 693 aa15.52■□□□□ 0.07
LTBR-201ENST00000228918 ICKQ9UPZ9 632 aa15.52■□□□□ 0.07
LTBR-201ENST00000228918 PEX16Q9Y5Y5 336 aa15.52■□□□□ 0.07
LTBR-201ENST00000228918 NINQ8N4C6 2090 aa15.52■□□□□ 0.07
LTBR-201ENST00000228918 DSPPQ9NZW4 1301 aa15.52■□□□□ 0.07
LTBR-201ENST00000228918 NUP210Q8TEM1 1887 aaPredicted RBP15.51■□□□□ 0.07
LTBR-201ENST00000228918 FAM47E-STBD1D6RA91 191 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 FAM227AF5H4B4 570 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 PTTG1O95997 202 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 CNR2P34972 360 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 PUM1Q14671 1186 aaKnown RBP eCLIP15.51■□□□□ 0.07
LTBR-201ENST00000228918 FRMPD2BQ6IN97 320 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 PTCHD4Q6ZW05 846 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 TRMT11Q7Z4G4 463 aaKnown RBP15.51■□□□□ 0.07
LTBR-201ENST00000228918 SLC44A2Q8IWA5 706 aaPredicted RBP15.51■□□□□ 0.07
LTBR-201ENST00000228918 UBE2E3Q969T4 207 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 PDXPQ96GD0 296 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 NLNQ9BYT8 704 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 ROGDIQ9GZN7 287 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 QPCTLQ9NXS2 382 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 KLHL3Q9UH77 587 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 KPNA3O00505 521 aaPredicted RBP15.51■□□□□ 0.07
LTBR-201ENST00000228918 FFAR1O14842 300 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 GTF2E2P29084 291 aaKnown RBP15.51■□□□□ 0.07
LTBR-201ENST00000228918 WEE1P30291 646 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 SLC15A1P46059 708 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 LIM2P55344 173 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 SELENBP1Q13228 472 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 DOC2BQ14184 412 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 MED22Q15528 200 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 TSTQ16762 297 aaKnown RBP15.51■□□□□ 0.07
LTBR-201ENST00000228918 ATCAYQ86WG3 371 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 TXNDC15Q96J42 360 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 MGLLQ99685 303 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 CLN6Q9NWW5 311 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 RBMX2Q9Y388 322 aaKnown RBP15.51■□□□□ 0.07
LTBR-201ENST00000228918 NOTCH4Q99466 2003 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 PTPRSQ13332 1948 aa15.51■□□□□ 0.07
LTBR-201ENST00000228918 KIAA0513O60268 411 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 KCNK2O95069 426 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 MED26O95402 600 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 PIPP12273 146 aaPredicted RBP15.5■□□□□ 0.07
LTBR-201ENST00000228918 ETV6P41212 452 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 PCYT1AP49585 367 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 METAP1P53582 386 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 PRMT2P55345 433 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 TPTEP56180 551 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 NDUFA5Q16718 116 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 TIMM50Q3ZCQ8 353 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 ARHGAP15Q53QZ3 475 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 RPS26P11Q5JNZ5 115 aaPredicted RBP15.5■□□□□ 0.07
LTBR-201ENST00000228918 PRAMEF14Q5SWL7 426 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 C6orf183Q5T699 404 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 PRAMEF13Q5VWM6 474 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 PLAG1Q6DJT9 500 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 FAM180BQ6P0A1 224 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 TMIGD1Q6UXZ0 262 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 CEACAM20Q6UY09 585 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 SLC9B2Q86UD5 537 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 ZNF547Q8IVP9 402 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 CYP4Z2PQ8N1L4 340 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 FAM46DQ8NEK8 389 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 SNX8Q9Y5X2 465 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 LAMA2P24043 3122 aaKnown RBP15.5■□□□□ 0.07
LTBR-201ENST00000228918 TRBV4-1A0A0J9YWV2 114 aa15.5■□□□□ 0.07
LTBR-201ENST00000228918 CCRL2O00421 344 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms