RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 DUX4L2P0CJ85 424 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 DUX4L3P0CJ86 424 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 DUX4L4P0CJ87 422 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 DUX4L5P0CJ88 424 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 DUX4L6P0CJ89 424 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 DUX4L7P0CJ90 424 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 PRR5P85299 388 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 HOXC5Q00444 222 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 LARS2Q15031 903 aaKnown RBP13.18□□□□□ -0.3
NFKB1-201ENST00000226574 COMMD6Q7Z4G1 85 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 PRSS58Q8IYP2 241 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 NEIL3Q8TAT5 605 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 CHPT1Q8WUD6 406 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 CENPOQ9BU64 300 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 MND1Q9BWT6 205 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 TTYH1Q9H313 450 aaPredicted RBP13.18□□□□□ -0.3
NFKB1-201ENST00000226574 HEBP1Q9NRV9 189 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 MRPL15Q9P015 296 aaKnown RBP13.18□□□□□ -0.3
NFKB1-201ENST00000226574 DUX4Q9UBX2 424 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 CARD8Q9Y2G2 431 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 CMAHPQ9Y471 501 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 GABRR3A8MPY1 467 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 INMT-MINDY4F8WBC2 141 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 M0R3H8 397 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 UPK1BO75841 260 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 TLE2Q04725 743 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF267Q14586 743 aaPredicted RBP13.18□□□□□ -0.3
NFKB1-201ENST00000226574 RGNQ15493 299 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF791Q3KP31 576 aaPredicted RBP13.18□□□□□ -0.3
NFKB1-201ENST00000226574 ZNF691Q5VV52 312 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 BCDIN3DQ7Z5W3 292 aaKnown RBP13.18□□□□□ -0.3
NFKB1-201ENST00000226574 NRARPQ7Z6K4 114 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 TMEM25Q86YD3 366 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 CELF2-AS1Q8N7Q2 184 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 SAMD12Q8N8I0 201 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 OR6C4Q8NGE1 309 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 GPR150Q8NGU9 434 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 OR51A7Q8NH64 312 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 RHOXF1Q8NHV9 184 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 GRPEL2Q8TAA5 225 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 SLC5A11Q8WWX8 675 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 MYEOVQ96EZ4 313 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 SLC22A12Q96S37 553 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 SECISBP2Q96T21 854 aaKnown RBP13.18□□□□□ -0.3
NFKB1-201ENST00000226574 PIP5K1AQ99755 562 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 POLR1DQ9Y2S0 133 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 CAPN5O15484 640 aaPredicted RBP13.18□□□□□ -0.3
NFKB1-201ENST00000226574 SLC10A3P09131 477 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 GABARAPL2P60520 117 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 BNC1Q01954 994 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 KCNC4Q03721 635 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 B3GLCTQ6Y288 498 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 OR4C6Q8NH72 309 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 TNFAIP8L1Q8WVP5 186 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 P2RX2Q9UBL9 471 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 IFT52Q9Y366 437 aa13.18□□□□□ -0.3
NFKB1-201ENST00000226574 CACNA1IQ9P0X4 2223 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 UBE2QL1A1L167 161 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 ARNTLO00327 626 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 NDUFS4O43181 175 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 CHST10O43529 356 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 OMPP47874 163 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 SMSP52788 366 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 ARF5P84085 180 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 PTGES3Q15185 160 aaKnown RBP13.17□□□□□ -0.3
NFKB1-201ENST00000226574 ZMYND11Q15326 602 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 SF3B4Q15427 424 aaKnown RBP eCLIP13.17□□□□□ -0.3
NFKB1-201ENST00000226574 CCDC157Q569K6 752 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 STEAP3Q658P3 488 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 NUDT13Q86X67 352 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 PCNPQ8WW12 178 aaKnown RBP13.17□□□□□ -0.3
NFKB1-201ENST00000226574 C17orf50Q8WW18 174 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 GINS4Q9BRT9 223 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 GORASP2Q9H8Y8 452 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 CCDC59Q9P031 241 aaKnown RBP13.17□□□□□ -0.3
NFKB1-201ENST00000226574 EXTL2Q9UBQ6 330 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 INSL5Q9Y5Q6 135 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 ADAMTS7Q9UKP4 1686 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 ACPPP15309 386 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 ACVR1BP36896 505 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 C2orf27AQ580R0 203 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 SNAP47Q5SQN1 464 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 RTL4Q6ZR62 310 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 OLIG3Q7RTU3 272 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 C6orf120Q7Z4R8 191 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 LCN9Q8WX39 176 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 RNF31Q96EP0 1072 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 SEC14L4Q9UDX3 406 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 LAMB1P07942 1786 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 AGAP5A6NIR3 686 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 RIIAD1A6NNX1 92 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 ANHXE9PGG2 379 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 PRMT3O60678 531 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 PAK4O96013 591 aaPredicted RBP13.17□□□□□ -0.3
NFKB1-201ENST00000226574 PRNPP04156 253 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 CSN2P05814 226 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 LRRC32Q14392 662 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 LDLRAD1Q5T700 205 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 GPR149Q86SP6 731 aa13.17□□□□□ -0.3
NFKB1-201ENST00000226574 PARP16Q8N5Y8 322 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms