RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 P3H2Q8IVL5 708 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 TAGAPQ8N103 731 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 LGI4Q8N135 537 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 OR2A1Q8NGT9 310 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 FAM131CQ96AQ9 280 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 THAP11Q96EK4 314 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 SIPA1Q96FS4 1042 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 PITX2Q99697 317 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 C17orf62Q9BQA9 187 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 GABARAPL3Q9BY60 117 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 LHPPQ9H008 270 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 SLC6A17Q9H1V8 727 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 ACSS1Q9NUB1 689 aaPredicted RBP7.86□□□□□ -1.15
VAMP3-201ENST00000054666 TEX10Q9NXF1 929 aaPredicted RBP7.86□□□□□ -1.15
VAMP3-201ENST00000054666 NDRG4Q9ULP0 352 aaKnown RBP7.86□□□□□ -1.15
VAMP3-201ENST00000054666 POFUT2Q9Y2G5 429 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 DGKBQ9Y6T7 804 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 ATG2BQ96BY7 2078 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 DOCK9Q9BZ29 2069 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 HEATR5BQ9P2D3 2071 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 A0A0A6YYD5 115 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 PRSS38A1L453 326 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 XPNPEP2O43895 674 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 TMPRSS11DO60235 418 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 ITIH1P19827 911 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 NDUFS1P28331 727 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 PPP2R1BP30154 601 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 FMO3P31513 532 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 CTHP32929 405 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 OR1E2P47887 323 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 ANXA11P50995 505 aaKnown RBP7.86□□□□□ -1.15
VAMP3-201ENST00000054666 KIAA1024LP59773 190 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 KCNC4Q03721 635 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 DCTN2Q13561 401 aaKnown RBP7.86□□□□□ -1.15
VAMP3-201ENST00000054666 TP53BP2Q13625 1128 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 SLC9A5Q14940 896 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 MAD2L1BPQ15013 274 aaPredicted RBP7.86□□□□□ -1.15
VAMP3-201ENST00000054666 RPE65Q16518 533 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 PRSS53Q2L4Q9 553 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 PROX2Q3B8N5 592 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 IQCCQ4KMZ1 466 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 FAM180BQ6P0A1 224 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 SLC44A2Q8IWA5 706 aaPredicted RBP7.86□□□□□ -1.15
VAMP3-201ENST00000054666 IL17RCQ8NAC3 791 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 SMYD1Q8NB12 490 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 ZNF540Q8NDQ6 660 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 SRFBP1Q8NEF9 429 aaKnown RBP7.86□□□□□ -1.15
VAMP3-201ENST00000054666 DENND6BQ8NEG7 585 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 PHF10Q8WUB8 498 aaKnown RBP7.86□□□□□ -1.15
VAMP3-201ENST00000054666 PROX1Q92786 737 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 EZH1Q92800 747 aaPredicted RBP7.86□□□□□ -1.15
VAMP3-201ENST00000054666 MUL1Q969V5 352 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 SLC35G5Q96KT7 338 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 KCNC2Q96PR1 638 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 PIP5K1AQ99755 562 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 EPS8L2Q9H6S3 715 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 DDX31Q9H8H2 851 aaKnown RBP7.86□□□□□ -1.15
VAMP3-201ENST00000054666 FGF22Q9HCT0 170 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 A4GALTQ9NPC4 353 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 SLAMF7Q9NQ25 335 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 PRDM8Q9NQV8 689 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 TMEM184CQ9NVA4 438 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 EHD3Q9NZN3 535 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 C5AR2Q9P296 337 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 SH3GLB1Q9Y371 365 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 NAALAD2Q9Y3Q0 740 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 A0A0G2JN53 185 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 A8MVJ9 347 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 ERI3O43414 337 aaKnown RBP7.85□□□□□ -1.15
VAMP3-201ENST00000054666 ATE1O95260 518 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 FUCA1P04066 466 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 HTR1AP08908 422 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 JUNDP17535 347 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 HTR1BP28222 390 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 AHRP35869 848 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 BCL6P41182 706 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 FRKP42685 505 aaPredicted RBP7.85□□□□□ -1.15
VAMP3-201ENST00000054666 PCBP4P57723 403 aaKnown RBP7.85□□□□□ -1.15
VAMP3-201ENST00000054666 PPP2CBP62714 309 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 PPP2CAP67775 309 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 RPP38P78345 283 aaKnown RBP7.85□□□□□ -1.15
VAMP3-201ENST00000054666 TGM3Q08188 693 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 LRRC32Q14392 662 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 EXOC3L2Q2M3D2 409 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 NDUFAF5Q5TEU4 345 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 USP30Q70CQ3 517 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 FAM124AQ86V42 546 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 HORMAD2Q8N7B1 307 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 OR2L3Q8NG85 312 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 OR52J3Q8NH60 311 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 CREB3L4Q8TEY5 395 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 IPCEF1Q8WWN9 437 aaPredicted RBP7.85□□□□□ -1.15
VAMP3-201ENST00000054666 RASSF5Q8WWW0 418 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 ASB12Q8WXK4 309 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 SGCDQ92629 289 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 RORBQ92753 470 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 PDXPQ96GD0 296 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 TMEM19Q96HH6 336 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 BBS4Q96RK4 519 aa7.85□□□□□ -1.15
VAMP3-201ENST00000054666 ZNF607Q96SK3 696 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms