RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 NUDT7P0C024 238 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 SLC35G6P0C7Q6 338 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 PRIM2P49643 509 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 SLC5A12Q1EHB4 618 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.42■□□□□ 0.226e-6■■■■□ 21.1
PHGDH-208ENST00000641023 FAM180BQ6P0A1 224 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 ASPGQ86U10 573 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 IQCHQ86VS3 1027 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 OR8K5Q8NH50 307 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 EXOSC8Q96B26 276 aaKnown RBP16.42■□□□□ 0.22
PHGDH-208ENST00000641023 CNBD2Q96M20 576 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 CHRDQ9H2X0 955 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 NTN4Q9HB63 628 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 GPATCH2Q9NW75 528 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 HRASLS2Q9NWW9 162 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 SNX8Q9Y5X2 465 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 ARHGEF17Q96PE2 2063 aaPredicted RBP16.42■□□□□ 0.22
PHGDH-208ENST00000641023 ATP5A1P25705 553 aaKnown RBP16.42■□□□□ 0.22
PHGDH-208ENST00000641023 FRKP42685 505 aaPredicted RBP16.42■□□□□ 0.22
PHGDH-208ENST00000641023 PCBP4P57723 403 aaKnown RBP16.42■□□□□ 0.22
PHGDH-208ENST00000641023 RACK1P63244 317 aaKnown RBP16.42■□□□□ 0.22
PHGDH-208ENST00000641023 RPL6Q02878 288 aaKnown RBP16.42■□□□□ 0.22
PHGDH-208ENST00000641023 HHEXQ03014 270 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 ZP2Q05996 745 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 RBBP4Q09028 425 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 C16orf72Q14CZ0 275 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 FBXO42Q6P3S6 717 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 TRIM73Q86UV7 250 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 OR5AK3PQ8NH89 298 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 ZDHHC1Q8WTX9 485 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 LRRC61Q9BV99 259 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 TBC1D17Q9HA65 648 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 ACSS1Q9NUB1 689 aaPredicted RBP16.42■□□□□ 0.22
PHGDH-208ENST00000641023 ZNF639Q9UID6 485 aa16.42■□□□□ 0.22
PHGDH-208ENST00000641023 GOLGA4Q13439 2230 aaKnown RBP16.42■□□□□ 0.22
PHGDH-208ENST00000641023 PCGF2P35227 344 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 CHN2P52757 468 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 RAB8AP61006 207 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 ELOCQ15369 112 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 NHSL2Q5HYW2 709 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 FIGLAQ6QHK4 219 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 TMEM26Q6ZUK4 368 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 CBLL1Q75N03 491 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 VN1R4Q7Z5H5 301 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 ZDHHC13Q8IUH4 622 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 MAL2Q969L2 176 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 TMBIM1Q969X1 311 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 GAL3ST3Q96A11 431 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 SDCCAG3Q96C92 435 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 C1GALT1Q9NS00 363 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 C5AR2Q9P296 337 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 MAP4K5Q9Y4K4 846 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 PLXND1Q9Y4D7 1925 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 URADA6NGE7 173 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 EI24O14681 340 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 TNFRSF21O75509 655 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 SNRNP200O75643 2136 aaKnown RBP16.41■□□□□ 0.22
PHGDH-208ENST00000641023 CSF2P04141 144 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 ETFAP13804 333 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 RELAQ04206 551 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 MLC1Q15049 377 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 COX20Q5RI15 118 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 GCNT6Q5T4J0 391 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 MRM1Q6IN84 353 aaKnown RBP16.41■□□□□ 0.22
PHGDH-208ENST00000641023 TMEM214Q6NUQ4 689 aaKnown RBP16.41■□□□□ 0.22
PHGDH-208ENST00000641023 SPESP1Q6UW49 350 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 EIF3MQ7L2H7 374 aaKnown RBP16.41■□□□□ 0.22
PHGDH-208ENST00000641023 RNF130Q86XS8 419 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 NT5CQ8TCD5 201 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 MAGEE2Q8TD90 523 aaPredicted RBP16.41■□□□□ 0.22
PHGDH-208ENST00000641023 THAP11Q96EK4 314 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 SPACA7Q96KW9 195 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 FCRL4Q96PJ5 515 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 OR2A5Q96R48 311 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 ASPSCR1Q9BZE9 553 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 TRIM4Q9C037 500 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 TMEM38AQ9H6F2 299 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 CXorf36Q9H7Y0 433 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 SYNPO2LQ9H987 977 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 SLAMF7Q9NQ25 335 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 DLGAP2Q9P1A6 1054 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 UTS2RQ9UKP6 389 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 ACSL6Q9UKU0 697 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 ASB4Q9Y574 426 aa16.41■□□□□ 0.22
PHGDH-208ENST00000641023 A0A1W2PR77 199 aa16.4■□□□□ 0.22
PHGDH-208ENST00000641023 C4orf51C9J302 202 aa16.4■□□□□ 0.22
PHGDH-208ENST00000641023 TLR4O00206 839 aa16.4■□□□□ 0.22
PHGDH-208ENST00000641023 UPK1AO00322 258 aa16.4■□□□□ 0.22
PHGDH-208ENST00000641023 AXIN1O15169 862 aa16.4■□□□□ 0.22
PHGDH-208ENST00000641023 WNT1P04628 370 aa16.4■□□□□ 0.22
PHGDH-208ENST00000641023 MAOBP27338 520 aa16.4■□□□□ 0.22
PHGDH-208ENST00000641023 FCRL6Q6DN72 434 aa16.4■□□□□ 0.22
PHGDH-208ENST00000641023 UGT2A3Q6UWM9 527 aa16.4■□□□□ 0.22
PHGDH-208ENST00000641023 OOSP2Q86WS3 158 aa16.4■□□□□ 0.22
PHGDH-208ENST00000641023 SFTPA2Q8IWL1 248 aa16.4■□□□□ 0.22
PHGDH-208ENST00000641023 DEFB123Q8N688 67 aa16.4■□□□□ 0.22
PHGDH-208ENST00000641023 PJA1Q8NG27 643 aa16.4■□□□□ 0.22
PHGDH-208ENST00000641023 CLDN23Q96B33 292 aa16.4■□□□□ 0.22
PHGDH-208ENST00000641023 MIR1-1HGQ9H1L0 117 aa16.4■□□□□ 0.22
PHGDH-208ENST00000641023 IL1RAPQ9NPH3 570 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms