RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 THUMPD3Q9BV44 507 aaKnown RBP11.88□□□□□ -0.51
SPIN3-236ENST00000640131 CCM2LQ9NUG4 571 aaPredicted RBP11.88□□□□□ -0.51
SPIN3-236ENST00000640131 C14orf119Q9NWQ9 140 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 VAPAQ9P0L0 249 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 DTX4Q9Y2E6 619 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 PCDHGA9Q9Y5G4 932 aaKnown RBP11.88□□□□□ -0.51
SPIN3-236ENST00000640131 TRIOO75962 3097 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 GRM6O15303 877 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 VPS4BO75351 444 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 MOSPD3O75425 235 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 SNAPINO95295 136 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 PDYNP01213 254 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 LINC00271P0C7V0 271 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 CCNYL3P0C7X3 344 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 SFTPCP11686 197 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 GPC1P35052 558 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 NSG1P42857 185 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 PSMD8P48556 350 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 CCSMST1Q4G0I0 132 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 PDSS1Q5T2R2 415 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 LRFN4Q6PJG9 635 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 CCDC149Q6ZUS6 474 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 ADIPOR2Q86V24 386 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 ZFAND4Q86XD8 727 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 CPXM2Q8N436 756 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 DNAJA4Q8WW22 397 aaPredicted RBP11.88□□□□□ -0.51
SPIN3-236ENST00000640131 BADQ92934 168 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 IRF7Q92985 503 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 P2RY13Q9BPV8 354 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 SPATA9Q9BWV2 254 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 ZDHHC3Q9NYG2 299 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 OSGIN1Q9UJX0 560 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 DLGAP4Q9Y2H0 992 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 TNPO3Q9Y5L0 923 aaKnown RBP11.88□□□□□ -0.51
SPIN3-236ENST00000640131 TRBV5-4A0A0C4DH59 114 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 FAM234BA2RU67 622 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 STMND1H3BQB6 276 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 GATCO43716 136 aaKnown RBP11.87□□□□□ -0.51
SPIN3-236ENST00000640131 EEDO75530 441 aaKnown RBP11.87□□□□□ -0.51
SPIN3-236ENST00000640131 MED26O95402 600 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 CDK1P06493 297 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 FCER2P06734 321 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 CTSLP07711 333 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 HRH2P25021 359 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 TACR1P25103 407 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 VIPR2P41587 438 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 SPINT3P49223 89 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 MEOX2P50222 304 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 GRIN2CQ14957 1233 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 NUMA1Q14980 2115 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 POU4F3Q15319 338 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 PTCHD3Q3KNS1 767 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 MPP7Q5T2T1 576 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 GDPD4Q6W3E5 623 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 HACD2Q6Y1H2 254 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 CAMKK1Q8N5S9 505 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 OR4D10Q8NGI6 311 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 OR10A6Q8NH74 314 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 MED8Q96G25 268 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 LRRC3BQ96PB8 259 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 ZNF300Q96RE9 604 aaPredicted RBP11.87□□□□□ -0.51
SPIN3-236ENST00000640131 RIOK2Q9BVS4 552 aaKnown RBP11.87□□□□□ -0.51
SPIN3-236ENST00000640131 BRINP2Q9C0B6 783 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 LTBP2Q14767 1821 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 TCF20Q9UGU0 1960 aaKnown RBP11.87□□□□□ -0.51
SPIN3-236ENST00000640131 PTGES3LE9PB15 166 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 KPNA3O00505 521 aaPredicted RBP11.87□□□□□ -0.51
SPIN3-236ENST00000640131 EPORP19235 508 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 SLC15A1P46059 708 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 ARFIP1P53367 373 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 DAB2P98082 770 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 INPP5AQ14642 412 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 IRAK1BP1Q5VVH5 260 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 THAP5Q7Z6K1 395 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 GALNT10Q86SR1 603 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 C12orf40Q86WS4 652 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 PHOSPHO2Q8TCD6 241 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 UBASH3BQ8TF42 649 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 SELENOMQ8WWX9 145 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 ATOH1Q92858 354 aaPredicted RBP11.87□□□□□ -0.51
SPIN3-236ENST00000640131 LGALS12Q96DT0 336 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 NODALQ96S42 347 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 APOL4Q9BPW4 351 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 DPY30Q9C005 99 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 SPHK2Q9NRA0 654 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 COA4Q9NYJ1 87 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 RAB23Q9ULC3 237 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 VCANP13611 3396 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 H0YAE9 185 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 TLL1O43897 1013 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 POP4O95707 220 aaKnown RBP11.87□□□□□ -0.51
SPIN3-236ENST00000640131 FABP1P07148 127 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 ANXA5P08758 320 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 CEBPBP17676 345 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 XPAP23025 273 aaPredicted RBP11.87□□□□□ -0.51
SPIN3-236ENST00000640131 RPS3P23396 243 aaKnown RBP eCLIP11.87□□□□□ -0.51
SPIN3-236ENST00000640131 GDI2P50395 445 aaKnown RBP11.87□□□□□ -0.51
SPIN3-236ENST00000640131 NUBP1P53384 320 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 TTLL9Q3SXZ7 439 aa11.87□□□□□ -0.51
SPIN3-236ENST00000640131 ANKRD34AQ69YU3 496 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms