RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 LCMT2O60294 686 aaKnown RBP10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 PSIP1O75475 530 aaKnown RBP10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 NDUFS3O75489 264 aa10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 SMNDC1O75940 238 aaKnown RBP eCLIP10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 B3GALT4O96024 378 aa10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 ZNF888P0CJ79 500 aaPredicted RBP10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 CYP4B1P13584 511 aa10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 SLC1A1P43005 524 aa10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 MTTPP55157 894 aa10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 EIF3BP55884 814 aaKnown RBP10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 GAB1Q13480 694 aa10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 SEMA3AQ14563 771 aa10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 DARS2Q6PI48 645 aaKnown RBP10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 TMEM132CQ8N3T6 1108 aa10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 SLC35G2Q8TBE7 412 aa10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 GTPBP3Q969Y2 492 aaKnown RBP10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 ADAM19Q9H013 955 aa10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 CCDC177Q9NQR7 707 aaPredicted RBP10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 CATSPERZQ9NTU4 200 aa10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 SLC2A6Q9UGQ3 507 aa10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 LAMP3Q9UQV4 416 aa10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 NOTCH1P46531 2555 aa10.07□□□□□ -0.8
PTP4A1-207ENST00000639568 hCG_1818297A0A087WSY0 165 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 APOC4-APOC2K7ER74 178 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 UBFD1O14562 309 aaKnown RBP10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 GPRIN2O60269 458 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 RCBTB2O95199 551 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 APOC2P02655 101 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 IFNA16P05015 189 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 PPP2R1BP30154 601 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 ACVR1BP36896 505 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 RPL21P46778 160 aaKnown RBP10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 RGS1Q08116 209 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 SLC13A2Q13183 592 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 PWP1Q13610 501 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 PARP6Q2NL67 630 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 KLHL38Q2WGJ6 581 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 VASNQ6EMK4 673 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 ZNF704Q6ZNC4 412 aaPredicted RBP10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 ZNF534Q76KX8 674 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 LINC00523Q86TU6 105 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 C17orf64Q86WR6 236 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 ZNF611Q8N823 705 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 TC2NQ8N9U0 490 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 MFSD9Q8NBP5 474 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 DAZLQ92904 295 aaKnown RBP10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 FAM136AQ96C01 138 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 ART5Q96L15 291 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 SLC39A3Q9BRY0 314 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 DOHHQ9BU89 302 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 HEMGNQ9BXL5 484 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 PACSIN1Q9BY11 444 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 PCBD2Q9H0N5 130 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 P2RY12Q9H244 342 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 ADAP2Q9NPF8 381 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 HOMER3Q9NSC5 361 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 CNIH4Q9P003 139 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 SLC6A5Q9Y345 797 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 HYOU1Q9Y4L1 999 aa10.06□□□□□ -0.8
PTP4A1-207ENST00000639568 USF3Q68DE3 2245 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 URADA6NGE7 173 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 LRRC3CA6NJW4 275 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 HS3ST1O14792 307 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 MSTNO14793 375 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 CD3EAPO15446 510 aaKnown RBP10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 PSMD3O43242 534 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 OR1F1O43749 312 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 ADAM11O75078 769 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 EGR1P18146 543 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 UGT2B10P36537 528 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 CD79BP40259 229 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 KCNJ5P48544 419 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 CASP9P55211 416 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 EIF3EP60228 445 aaKnown RBP10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 RNF4P78317 190 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 TOMM20Q15388 145 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 RPS6KA1Q15418 735 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 ELAVL1Q15717 326 aaKnown RBP10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 BBS9Q3SYG4 887 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 TSTD2Q5T7W7 516 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 MILR1Q7Z6M3 343 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 RCOR2Q8IZ40 523 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 GCNT2Q8N0V5 402 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 TBC1D19Q8N5T2 526 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 MORN4Q8NDC4 146 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 FAM13CQ8NE31 585 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 ZPLD1Q8TCW7 415 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 PAQR8Q8TEZ7 354 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 SLC44A1Q8WWI5 657 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 ABTB1Q969K4 478 aaPredicted RBP10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 WDYHV1Q96HA8 205 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 RHNO1Q9BSD3 238 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 OR8D2Q9GZM6 311 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 SLCO5A1Q9H2Y9 848 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 GTF3C3Q9Y5Q9 886 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 SVEP1Q4LDE5 3571 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 TENM1Q9UKZ4 2725 aa10.05□□□□□ -0.8
PTP4A1-207ENST00000639568 SYNDIG1LA6NDD5 238 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 H3BMM5 538 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 C16orf97H3BN30 126 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms