RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 ASB9Q96DX5 294 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 CERS2Q96G23 380 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 TOE1Q96GM8 510 aaKnown RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 NSMCE3Q96MG7 304 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 ZNF578Q96N58 590 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 LRRC3BQ96PB8 259 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 OMDQ99983 421 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 HSD17B14Q9BPX1 270 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 TMEM47Q9BQJ4 181 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 C7orf50Q9BRJ6 194 aaKnown RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 MED10Q9BTT4 135 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 MSTO1Q9BUK6 570 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 TEKT3Q9BXF9 490 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 NMNAT2Q9BZQ4 307 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 CLPBQ9H078 707 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 WWP1Q9H0M0 922 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 POLR3FQ9H1D9 316 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 HIPK2Q9H2X6 1198 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 MMP27Q9H306 513 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 FAM83DQ9H4H8 585 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 RANBP3Q9H6Z4 567 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 CALHM2Q9HA72 323 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 KLHL1Q9NR64 748 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 C20orf141Q9NUB4 165 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 C20orf96Q9NUD7 363 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 PIGVQ9NUD9 493 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 PARVAQ9NVD7 372 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 PAG1Q9NWQ8 432 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 CMTM6Q9NX76 183 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 SIDT1Q9NXL6 827 aaKnown RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 DPP3Q9NY33 737 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 ADA2Q9NZK5 511 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 NCKIPSDQ9NZQ3 722 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 ABI3Q9P2A4 366 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 STOX2Q9P2F5 926 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 PEMTQ9UBM1 199 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 RNF14Q9UBS8 474 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 CNOT8Q9UFF9 292 aaKnown RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 EXO1Q9UQ84 846 aaKnown RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 CA5BQ9Y2D0 317 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 UBE2J1Q9Y385 318 aaPredicted RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 FAM32AQ9Y421 112 aaKnown RBP2.86□□□□□ -1.95
VIM-210ENST00000637053 NOX1Q9Y5S8 564 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 ACTL7AQ9Y615 435 aa2.86□□□□□ -1.95
VIM-210ENST00000637053 A0A1B0GW15 77 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 GNG14A0A1W2PPG7 69 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 PRAMEF22A3QJZ6 481 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 CLEC18AA5D8T8 446 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 FABP12A6NFH5 140 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 CGB1A6NKQ9 187 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 ANKRD30BLA7E2S9 258 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 ARHGEF33A8MVX0 844 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 TMEM238C9JI98 176 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 C9JVG2 144 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 F8VP50 259 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 H0YIG0 161 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 M0QYT0 321 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 ACOT7O00154 380 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 MATN2O00339 956 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 CLDN4O14493 209 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 ZNF213O14771 459 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 FOXN1O15353 648 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 CNOT3O75175 753 aaKnown RBP2.85□□□□□ -1.95
VIM-210ENST00000637053 GPC4O75487 556 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 CYP7B1O75881 506 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 OR4F21O95013 312 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 VAMP5O95183 116 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 OAZ2O95190 189 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 OR6A2O95222 327 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 BRI3O95415 125 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 F10P00742 488 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 ADAP00813 363 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 PIGRP01833 764 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 TNNC2P02585 160 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 GNAI3P08754 354 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 ELFN1P0C7U0 828 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 SLC35E2BP0CK96 405 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 SLC35E2P0CK97 266 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 FGF5P12034 268 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 PFKFB1P16118 471 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 ZNF18P17022 549 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 ZNF7P17097 686 aaPredicted RBP2.85□□□□□ -1.95
VIM-210ENST00000637053 IGFBP2P18065 325 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 TNNI1P19237 187 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 ITGAXP20702 1163 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 MAKP20794 623 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 S1PR1P21453 382 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 UBA1P22314 1058 aaKnown RBP2.85□□□□□ -1.95
VIM-210ENST00000637053 ACKR3P25106 362 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 AZGP1P25311 298 aaKnown RBP2.85□□□□□ -1.95
VIM-210ENST00000637053 ACRV1P26436 265 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 PSMB4P28070 264 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 HOXD9P28356 352 aaPredicted RBP2.85□□□□□ -1.95
VIM-210ENST00000637053 TYK2P29597 1187 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 ECHS1P30084 290 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 BDKRB2P30411 391 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 HNRNPH1P31943 449 aaKnown RBP2.85□□□□□ -1.95
VIM-210ENST00000637053 EPHX2P34913 555 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 OR1D2P34982 312 aa2.85□□□□□ -1.95
VIM-210ENST00000637053 ACADVLP49748 655 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms