RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 METTL27Q8N6F8 245 aaPredicted RBP13.7□□□□□ -0.22
LINC00339-208ENST00000634934 C1orf52Q8N6N3 182 aaKnown RBP13.7□□□□□ -0.22
LINC00339-208ENST00000634934 PPP3R2Q96LZ3 170 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 KCNC2Q96PR1 638 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 TAAR9Q96RI9 348 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 COPS7BQ9H9Q2 264 aaPredicted RBP13.7□□□□□ -0.22
LINC00339-208ENST00000634934 ANKHQ9HCJ1 492 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 C1orf109Q9NX04 203 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 SLC22A7Q9Y694 548 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 ADAMTS20P59510 1910 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 SPTBP11277 2137 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 KIF26BQ2KJY2 2108 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 A0A0A6YYC8 382 aaPredicted RBP13.69□□□□□ -0.22
LINC00339-208ENST00000634934 I3L1I5 382 aaPredicted RBP13.69□□□□□ -0.22
LINC00339-208ENST00000634934 MED26O95402 600 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 NTRK1P04629 796 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 EMP3P54852 163 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 RPL38P63173 70 aaKnown RBP13.69□□□□□ -0.22
LINC00339-208ENST00000634934 MXRA7P84157 204 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 SPIN4Q56A73 249 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 OR4C11Q6IEV9 310 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 ZFP1Q6P2D0 407 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 PRSS41Q7RTY9 318 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 COMMD6Q7Z4G1 85 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 PDSS2Q86YH6 399 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 KBTBD2Q8IY47 623 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 METTL4Q8N3J2 472 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 ARHGEF39Q8N4T4 335 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 DTWD1Q8N5C7 304 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 FNDC5Q8NAU1 212 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 RP9Q8TA86 221 aaKnown RBP13.69□□□□□ -0.22
LINC00339-208ENST00000634934 CHTF18Q8WVB6 975 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 CLIP3Q96DZ5 547 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 OR52B2Q96RD2 323 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 TBCDQ9BTW9 1192 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 ENAMQ9NRM1 1142 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 C6orf203Q9P0P8 240 aaPredicted RBP13.69□□□□□ -0.22
LINC00339-208ENST00000634934 DHCR7Q9UBM7 475 aaKnown RBP13.69□□□□□ -0.22
LINC00339-208ENST00000634934 SRPK3Q9UPE1 567 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 NAALAD2Q9Y3Q0 740 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 B3GALT1Q9Y5Z6 326 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 ZNF860A6NHJ4 632 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 EEDO75530 441 aaKnown RBP13.69□□□□□ -0.22
LINC00339-208ENST00000634934 MYO1DO94832 1006 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 KLHL18O94889 574 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 TNFSF15O95150 251 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 GBAP04062 536 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 KLK1P06870 262 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 SMIM10L1P0DMW3 83 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 COX4I1P13073 169 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 LBPP18428 481 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 ITGAXP20702 1163 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 ZNF10P21506 573 aaPredicted RBP13.69□□□□□ -0.22
LINC00339-208ENST00000634934 PRPH2P23942 346 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 BSGP35613 385 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 CPA2P48052 419 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 GABREP78334 506 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 SHC2P98077 582 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 KLF10Q13118 480 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 RFTN2Q52LD8 501 aaPredicted RBP13.69□□□□□ -0.22
LINC00339-208ENST00000634934 C6orf136Q5SQH8 315 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 TMEM164Q5U3C3 297 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 C1orf189Q5VU69 101 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 IRAK1BP1Q5VVH5 260 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 YOD1Q5VVQ6 348 aaPredicted RBP13.69□□□□□ -0.22
LINC00339-208ENST00000634934 C16orf89Q6UX73 402 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 PAGE2Q7Z2X7 111 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 NUDT13Q86X67 352 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 ZFAND4Q86XD8 727 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 CATSPER1Q8NEC5 780 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 OR9A4Q8NGU2 314 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 SMIM10Q96HG1 83 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 MAELQ96JY0 434 aaKnown RBP13.69□□□□□ -0.22
LINC00339-208ENST00000634934 TEFMQ96QE5 360 aaKnown RBP13.69□□□□□ -0.22
LINC00339-208ENST00000634934 C1orf50Q9BV19 199 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 EBPLQ9BY08 206 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 ASPSCR1Q9BZE9 553 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 ULBP3Q9BZM4 244 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 ROGDIQ9GZN7 287 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 TCF7L2Q9NQB0 619 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 PRDM7Q9NQW5 492 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 POLR3HQ9Y535 204 aaPredicted RBP13.69□□□□□ -0.22
LINC00339-208ENST00000634934 PCDHB3Q9Y5E6 796 aa13.69□□□□□ -0.22
LINC00339-208ENST00000634934 ZFHX4Q86UP3 3567 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 ARHGAP10A1A4S6 786 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 SGK494L7N484 410 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 DSCR3O14972 297 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 FOXS1O43638 330 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 GALR3O60755 368 aaPredicted RBP13.68□□□□□ -0.22
LINC00339-208ENST00000634934 HBQ1P09105 142 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 ZNF28P17035 718 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 HIST1H1TP22492 207 aaPredicted RBP13.68□□□□□ -0.22
LINC00339-208ENST00000634934 ATP5A1P25705 553 aaKnown RBP13.68□□□□□ -0.22
LINC00339-208ENST00000634934 CERS1P27544 350 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 GCGRP47871 477 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 AVPR1BP47901 424 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 SESN3P58005 492 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 CCNIQ14094 377 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 FAM53BQ14153 422 aa13.68□□□□□ -0.22
LINC00339-208ENST00000634934 LSM12Q3MHD2 195 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms