RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 APLFQ8IW19 511 aaPredicted RBP4.63□□□□□ -1.67
LINC00550-201ENST00000629293 FDCSPQ8NFU4 85 aa4.63□□□□□ -1.67
LINC00550-201ENST00000629293 GPR150Q8NGU9 434 aa4.63□□□□□ -1.67
LINC00550-201ENST00000629293 ARRDC2Q8TBH0 407 aa4.63□□□□□ -1.67
LINC00550-201ENST00000629293 EID2BQ96D98 161 aa4.63□□□□□ -1.67
LINC00550-201ENST00000629293 C1GALT1C1Q96EU7 318 aa4.63□□□□□ -1.67
LINC00550-201ENST00000629293 OR52B2Q96RD2 323 aa4.63□□□□□ -1.67
LINC00550-201ENST00000629293 SLC29A3Q9BZD2 475 aa4.63□□□□□ -1.67
LINC00550-201ENST00000629293 EPB41L1Q9H4G0 881 aa4.63□□□□□ -1.67
LINC00550-201ENST00000629293 S100A14Q9HCY8 104 aa4.63□□□□□ -1.67
LINC00550-201ENST00000629293 SLC6A20Q9NP91 592 aa4.63□□□□□ -1.67
LINC00550-201ENST00000629293 SLC39A10Q9ULF5 831 aa4.63□□□□□ -1.67
LINC00550-201ENST00000629293 FAM95CA0A1B0GW59 222 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 OR6C74A6NCV1 312 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 NOTOA8MTQ0 251 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 SCDO00767 359 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 HDAC3O15379 428 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 PHGDHO43175 533 aaKnown RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 POP7O75817 140 aaKnown RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 ESR1P03372 595 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 NELFEP18615 380 aaKnown RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 CYP2A7P20853 494 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 TEAD1P28347 426 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 SLC1A2P43004 574 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 CTSCP53634 463 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 MTTPP55157 894 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 AP2B1P63010 937 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 MPP1Q00013 466 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 TMEM115Q12893 351 aaPredicted RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 DLG1Q12959 904 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 HERC3Q15034 1050 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 GSTA3Q16772 222 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 KLHL35Q6PF15 583 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 AMZ2Q86W34 360 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 LRRC49Q8IUZ0 686 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 AVL9Q8NBF6 648 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 OR4E2Q8NGC2 313 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 KCTD4Q8WVF5 259 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 TADA1Q96BN2 335 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 C12orf66Q96MD2 445 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 RANBP9Q96S59 729 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 ZSCAN5AQ9BUG6 496 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 CCDC28BQ9BUN5 200 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 FICDQ9BVA6 458 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 CD244Q9BZW8 370 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 ZNF768Q9H5H4 540 aaKnown RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 ASF1BQ9NVP2 202 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 GPR83Q9NYM4 423 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 FBXO9Q9UK97 447 aaPredicted RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 ZNF711Q9Y462 761 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 ARHGAP10A1A4S6 786 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 H3BNX3 289 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 GOLGA8TH3BQL2 631 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 ACOT7O00154 380 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 WISP3O95389 354 aaPredicted RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 PVRP15151 417 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 XRCC1P18887 633 aaPredicted RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 ADSLP30566 484 aaPredicted RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 CHRNA4P43681 627 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 GLRBP48167 497 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 DNAJB13P59910 316 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 RAB10P61026 200 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 RPL11P62913 178 aaKnown RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 MXRA7P84157 204 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 ACY1Q03154 408 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 CDC16Q13042 620 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 PRKAA1Q13131 559 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 ATP1A4Q13733 1029 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 USP10Q14694 798 aaKnown RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 PTPRCAPQ14761 206 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 CHRNA6Q15825 494 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 SLC14A2Q15849 920 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 C1orf189Q5VU69 101 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 JMJD6Q6NYC1 403 aaPredicted RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 TMEM220Q6QAJ8 160 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 GALNT7Q86SF2 657 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 ZAR1Q86SH2 424 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 DHDDSQ86SQ9 333 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 ZNF547Q8IVP9 402 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 CEP97Q8IW35 865 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 DENND6AQ8IWF6 608 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 SLC38A9Q8NBW4 561 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 PPHLN1Q8NEY8 458 aaKnown RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 IPMKQ8NFU5 416 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 KIAA1191Q96A73 305 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 MAELQ96JY0 434 aaKnown RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 C5orf34Q96MH7 638 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 NRTNQ99748 197 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 NUDT9Q9BW91 350 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 ILKAPQ9H0C8 392 aaPredicted RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 RMI1Q9H9A7 625 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 TCF7L2Q9NQB0 619 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 POT1Q9NUX5 634 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 NDE1Q9NXR1 346 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 CPSF2Q9P2I0 782 aaKnown RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 XPR1Q9UBH6 696 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 SLC2A6Q9UGQ3 507 aa4.62□□□□□ -1.67
LINC00550-201ENST00000629293 ERRFI1Q9UJM3 462 aaPredicted RBP4.62□□□□□ -1.67
LINC00550-201ENST00000629293 EDARQ9UNE0 448 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms