RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 CIDECQ96AQ7 238 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-214ENST00000620676 SNX18Q96RF0 628 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 DPP7Q9UHL4 492 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 PCDHB14Q9Y5E9 798 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 CCDC163A0A0D9SF12 145 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 HIST1H2ABP04908 130 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 ANXA5P08758 320 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 HTR2AP28223 471 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 ITPK1Q13572 414 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 BLOC1S3Q6QNY0 202 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 HIST3H2AQ7L7L0 130 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 NKAPQ8N5F7 415 aaKnown RBP4.86□□□□□ -1.63
VPS13D-214ENST00000620676 HIST1H2ACQ93077 130 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 OR2M4Q96R27 311 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 VRK1Q99986 396 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-214ENST00000620676 DNTTIP1Q9H147 329 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 AKIP1Q9NQ31 210 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 UXTQ9UBK9 157 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-214ENST00000620676 TRPV2Q9Y5S1 764 aa4.86□□□□□ -1.63
VPS13D-214ENST00000620676 BMPR1AP36894 532 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 CAMK2BQ13554 666 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 SIRPB2Q5JXA9 342 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 DPPA4Q7L190 304 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 SLCO4A1Q96BD0 722 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 C3orf30Q96M34 536 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 ABCA6Q8N139 1617 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 F5H5P2 479 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 CASC3O15234 703 aaKnown RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 RAF1P04049 648 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 BCKDHAP12694 445 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 PPT1P50897 306 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 OR12D2P58182 307 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 NPRL3Q12980 569 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 UBE2R2Q712K3 238 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 TRMT11Q7Z4G4 463 aaKnown RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 IQCHQ86VS3 1027 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 OR5M11Q96RB7 305 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 ATG5Q9H1Y0 275 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 PIM2Q9P1W9 311 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 SLC19A2O60779 497 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 C6P13671 934 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 ALDH3B1P43353 468 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 RAB5CP51148 216 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 LINC00052Q96N35 136 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 CCDC86Q9H6F5 360 aaKnown RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 CD84Q9UIB8 345 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 MAGEB17A8MXT2 336 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 CLIC1O00299 241 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 GRIN3BO60391 1043 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 FADS1O60427 444 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 RPS6KA4O75676 772 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 SEC14L2O76054 403 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 PTHP01270 115 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 F3P13726 295 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 NME1P15531 152 aaKnown RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF691Q5VV52 312 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF527Q8NB42 609 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 HMCESQ96FZ2 354 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 OSMRQ99650 979 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 PTPN18Q99952 460 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 SLC35A5Q9BS91 424 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 ACOT13Q9NPJ3 140 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 NPAP1Q9NZP6 1156 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 CPNE7Q9UBL6 633 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 PCDHGA9Q9Y5G4 932 aaKnown RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 TMEM235A6NFC5 223 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 WRBO00258 174 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 ERAL1O75616 437 aaKnown RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 DGKAP23743 735 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 TPGS1Q6ZTW0 290 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 HFE2Q6ZVN8 426 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 BEND5Q7L4P6 421 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 MRPL41Q8IXM3 137 aaKnown RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 MFFQ9GZY8 342 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 SEC14L3Q9UDX4 400 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 PCDHB7Q9Y5E2 793 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 KIAA0556O60303 1618 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 NPIPA7E9PJI5 369 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 MPZL2O60487 215 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 NIPSNAP2O75323 286 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 SLC35E2BP0CK96 405 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 NPIPA8P0DM63 369 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 NQO2P16083 231 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 DDOSTP39656 456 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 ADAM8P78325 824 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 LIX1LQ8IVB5 337 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 OTUB2Q96DC9 234 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 DHRS4Q9BTZ2 278 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 SLC25A18Q9H1K4 315 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 TCF7L1Q9HCS4 588 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 ZNF26P17031 533 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 MAOBP27338 520 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 OR1G1P47890 313 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 CLCNKBP51801 687 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 SH3BP2P78314 561 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 AAK1Q2M2I8 961 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 ALG11Q2TAA5 492 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 RPS26P11Q5JNZ5 115 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-214ENST00000620676 NOTUMQ6P988 496 aa4.85□□□□□ -1.63
VPS13D-214ENST00000620676 CLEC9AQ6UXN8 241 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms