RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 CLEC3AO75596 197 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 VIMP08670 466 aaKnown RBP14.05□□□□□ -0.16
UBXN1-218ENST00000616865 SERPINB3P29508 390 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 PIK3CBP42338 1070 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 RPL14P50914 215 aaKnown RBP14.05□□□□□ -0.16
UBXN1-218ENST00000616865 STXBP1P61764 594 aaKnown RBP14.05□□□□□ -0.16
UBXN1-218ENST00000616865 DCDP81605 110 aaKnown RBP14.05□□□□□ -0.16
UBXN1-218ENST00000616865 PWP1Q13610 501 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 GRM7Q14831 915 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 SLC9A5Q14940 896 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 NDUFA9Q16795 377 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 TOR1AIP1Q5JTV8 583 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 MRPL14Q6P1L8 145 aaKnown RBP14.05□□□□□ -0.16
UBXN1-218ENST00000616865 Q6ZS92 163 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 FAM47EQ6ZV65 393 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 PPP1R32Q7Z5V6 425 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 DDIASQ8IXT1 998 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 ZADH2Q8N4Q0 377 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 ZNF781Q8N8C0 355 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 ANKRD53Q8N9V6 530 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 HUS1BQ8NHY5 278 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 CMTM7Q96FZ5 175 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 FAR2Q96K12 515 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 NDC1Q9BTX1 674 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 SPRTNQ9H040 489 aaPredicted RBP14.05□□□□□ -0.16
UBXN1-218ENST00000616865 ZBTB20Q9HC78 741 aaPredicted RBP14.05□□□□□ -0.16
UBXN1-218ENST00000616865 NMRK1Q9NWW6 199 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 IFT80Q9P2H3 777 aaPredicted RBP14.05□□□□□ -0.16
UBXN1-218ENST00000616865 ZDHHC2Q9UIJ5 367 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 SRPK3Q9UPE1 567 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 NTNG1Q9Y2I2 539 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 HEATR5BQ9P2D3 2071 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 SEC16AO15027 2179 aa14.05□□□□□ -0.16
UBXN1-218ENST00000616865 CROCCQ5TZA2 2017 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 TGFB1P01137 390 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 PDYNP01213 254 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 CTSBP07858 339 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 UMODP07911 640 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 SERPINA6P08185 405 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 FGF4P08620 206 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 ATXN8OSP0DMR3 200 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 KITP10721 976 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 PTX3P26022 381 aaPredicted RBP14.04□□□□□ -0.16
UBXN1-218ENST00000616865 ARRB2P32121 409 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 NEK2P51955 445 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 RAP1GDS1P52306 607 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 GYS2P54840 703 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 FOXA1P55317 472 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 FOXL2P58012 376 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 OCRLQ01968 901 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 TGM3Q08188 693 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 TCHHL1Q5QJ38 904 aaPredicted RBP14.04□□□□□ -0.16
UBXN1-218ENST00000616865 KANK2Q63ZY3 851 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 TLDC1Q6P9B6 456 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 SCIMPQ6UWF3 145 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 CHSY3Q70JA7 882 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 NT5CQ8TCD5 201 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 SORT1Q99523 831 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 SERPINI1Q99574 410 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 C20orf27Q9GZN8 174 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 TNFRSF12AQ9NP84 129 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 DMRT3Q9NQL9 472 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 TXLNGQ9NUQ3 528 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 PNPOQ9NVS9 261 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 TSC22D4Q9Y3Q8 395 aa14.04□□□□□ -0.16
UBXN1-218ENST00000616865 MAGEB17A8MXT2 336 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 TMEM233B4DJY2 109 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 SLCO1B7G3V0H7 640 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 SLC28A1O00337 649 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 FOXE1O00358 373 aaPredicted RBP14.03□□□□□ -0.16
UBXN1-218ENST00000616865 SH3BGRLO75368 114 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 SKAP2O75563 359 aaPredicted RBP14.03□□□□□ -0.16
UBXN1-218ENST00000616865 HK2P52789 917 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 ARSFP54793 590 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 RPS13P62277 151 aaKnown RBP14.03□□□□□ -0.16
UBXN1-218ENST00000616865 ZNF33BQ06732 778 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 CSTF3Q12996 717 aaKnown RBP14.03□□□□□ -0.16
UBXN1-218ENST00000616865 PDCD2Q16342 344 aaPredicted RBP14.03□□□□□ -0.16
UBXN1-218ENST00000616865 HKDC1Q2TB90 917 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 FAM214AQ32MH5 1076 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 NKAIN1Q4KMZ8 207 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 SPDYAQ5MJ70 313 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 ADNP2Q6IQ32 1131 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 RGS9BPQ6ZS82 235 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 ABHD13Q7L211 337 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 VN1R4Q7Z5H5 301 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 TMEM151BQ8IW70 566 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 GBP7Q8N8V2 638 aaPredicted RBP14.03□□□□□ -0.16
UBXN1-218ENST00000616865 ST6GALNAC3Q8NDV1 305 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 ZCCHC10Q8TBK6 192 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 WDR20Q8TBZ3 569 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 ZNF473Q8WTR7 871 aaKnown RBP14.03□□□□□ -0.16
UBXN1-218ENST00000616865 TWIST2Q8WVJ9 160 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 C7orf26Q96N11 449 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 MACROD1Q9BQ69 325 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 WDR77Q9BQA1 342 aaPredicted RBP14.03□□□□□ -0.16
UBXN1-218ENST00000616865 BRF2Q9HAW0 419 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 SLCO1B3Q9NPD5 702 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 ATP13A2Q9NQ11 1180 aa14.03□□□□□ -0.16
UBXN1-218ENST00000616865 AGPAT4Q9NRZ5 378 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms