RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 PFDN5Q99471 154 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 SLC38A3Q99624 504 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 NTMT1Q9BV86 223 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 TM9SF3Q9HD45 589 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 TAS2R9Q9NYW1 312 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 SSR3Q9UNL2 185 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 CFL2Q9Y281 166 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 H3BMQ9 156 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 SGCEO43556 437 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 APOC1P02654 83 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 DRD2P14416 443 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 TIA1P31483 386 aaKnown RBP eCLIP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 CBX5P45973 191 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 CLDN8P56748 225 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 ACVR1Q04771 509 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 FGL2Q14314 439 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 LRRC26Q2I0M4 334 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 HKDC1Q2TB90 917 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 AKIRIN2Q53H80 203 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 ALG1LQ6GMV1 187 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 ANKRD26P1Q6NSI1 321 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 LCTLQ6UWM7 567 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 NAPRTQ6XQN6 538 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 PTCHD4Q6ZW05 846 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 VASH1Q7L8A9 365 aaPredicted RBP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 AURKBQ96GD4 344 aaPredicted RBP8.39□□□□□ -1.07
PDE6A-204ENST00000613228 SLC45A3Q96JT2 553 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 COG8Q96MW5 612 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 SORT1Q99523 831 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 GAL3ST1Q99999 423 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 CDADC1Q9BWV3 514 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 SLC46A2Q9BY10 475 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 TAC3Q9UHF0 121 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 TBX21Q9UL17 535 aa8.39□□□□□ -1.07
PDE6A-204ENST00000613228 GFRA2O00451 464 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 SLC31A1O15431 190 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 POU2F2P09086 479 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 PIM1P11309 404 aaPredicted RBP8.38□□□□□ -1.07
PDE6A-204ENST00000613228 ACTR1BP42025 376 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 NCBP2P52298 156 aaKnown RBP eCLIP8.38□□□□□ -1.07
PDE6A-204ENST00000613228 ACTR1AP61163 376 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 NXPE4Q6UWF7 544 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 CADM2Q8N3J6 435 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 BBS10Q8TAM1 723 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 KXD1Q9BQD3 176 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 COPS4Q9BT78 406 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 EPHX3Q9H6B9 360 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 POLE4Q9NR33 117 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 HPF1Q9NWY4 346 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 NDRG2Q9UN36 371 aaKnown RBP8.38□□□□□ -1.07
PDE6A-204ENST00000613228 FAM86C2PA6NEL3 165 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 NDUFS4O43181 175 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 APBB3O95704 486 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 FUCA1P04066 466 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 UBL4AP11441 157 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 XRCC1P18887 633 aaPredicted RBP8.38□□□□□ -1.07
PDE6A-204ENST00000613228 ATP5A1P25705 553 aaKnown RBP8.38□□□□□ -1.07
PDE6A-204ENST00000613228 MTPNP58546 118 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 RPS15AP62244 130 aaKnown RBP8.38□□□□□ -1.07
PDE6A-204ENST00000613228 TOR1AIP1Q5JTV8 583 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 OLIG1Q8TAK6 271 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 MTERF1Q99551 399 aaKnown RBP8.38□□□□□ -1.07
PDE6A-204ENST00000613228 PKP2Q99959 881 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 DPEP2Q9H4A9 486 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 RPF2Q9H7B2 306 aaKnown RBP8.38□□□□□ -1.07
PDE6A-204ENST00000613228 ZNF395Q9H8N7 513 aaPredicted RBP8.38□□□□□ -1.07
PDE6A-204ENST00000613228 SCPEP1Q9HB40 452 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 GPN1Q9HCN4 374 aaPredicted RBP8.38□□□□□ -1.07
PDE6A-204ENST00000613228 BRD7Q9NPI1 651 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 POFUT2Q9Y2G5 429 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 OR14I1A6ND48 311 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 IQCF5A8MTL0 148 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 ZNF217O75362 1048 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 OR6A2O95222 327 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 PDYNP01213 254 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 OR3A3P47888 321 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 RCAN2Q14206 197 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 CEP68Q76N32 757 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.38□□□□□ -1.07
PDE6A-204ENST00000613228 SLC35B4Q969S0 331 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 ESAMQ96AP7 390 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 RHBDF1Q96CC6 855 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 LMLNQ96KR4 655 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 ZIC5Q96T25 663 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 MROQ9BYG7 248 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 ACTL8Q9H568 366 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 EVA1AQ9H8M9 152 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 SIAEQ9HAT2 523 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 IL26Q9NPH9 171 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 H0YAE9 185 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 STX11O75558 287 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 KCNA5P22460 613 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 AGTR2P50052 363 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 BMXP51813 675 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 AP2S1P53680 142 aaPredicted RBP8.38□□□□□ -1.07
PDE6A-204ENST00000613228 RPS13P62277 151 aaKnown RBP8.38□□□□□ -1.07
PDE6A-204ENST00000613228 HMGCS1Q01581 520 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 ELOCQ15369 112 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 NOXRED1Q6NXP6 359 aa8.38□□□□□ -1.07
PDE6A-204ENST00000613228 FAM220AQ7Z4H9 259 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms