RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 MFGE8Q08431 387 aaPredicted RBP3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 ELAVL2Q12926 359 aaKnown RBP3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 SPHARQ15513 63 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 MLF2Q15773 248 aaPredicted RBP3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 ACKR1Q16570 336 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 LPAL2Q16609 132 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 FUT11Q495W5 492 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 LYPLAL1Q5VWZ2 237 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 NEPROQ6NW34 567 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 TMEM64Q6YI46 380 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 CYP4V2Q6ZWL3 525 aaPredicted RBP3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 Q71RC1 249 aaPredicted RBP3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 NLRP14Q86W24 1093 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 CARM1Q86X55 608 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 SNX32Q86XE0 403 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 TMEM126BQ8IUX1 230 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 CNTN4Q8IWV2 1026 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 THEM5Q8N1Q8 247 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 Q8N377 158 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 CARNMT1Q8N4J0 409 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 ZNF485Q8NCK3 441 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 TRPV3Q8NET8 790 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 OR52B6Q8NGF0 335 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 C8orf46Q8TAG6 207 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 SPATA18Q8TC71 538 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 MIPOL1Q8TD10 442 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 LRRC15Q8TF66 581 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 LIPHQ8WWY8 451 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 KRT35Q92764 455 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 PRAM1Q96QH2 718 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 NUSAP1Q9BXS6 441 aaKnown RBP3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 DNAJC11Q9NVH1 559 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 UBQLN2Q9UHD9 624 aa3.18□□□□□ -1.9
RNU6-88P-201ENST00000606801 TRBV5-4A0A0C4DH59 114 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 FAM149AA5PLN7 773 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 STBD1O95210 358 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 THEGLP0DJG4 465 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 GLRA1P23415 457 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 CCR4P51679 360 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 SMSP52788 366 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 ERVK-16P61578 105 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 FKBP3Q00688 224 aaKnown RBP3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 GABPAQ06546 454 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 PAX8Q06710 450 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 ACTN3Q08043 901 aaPredicted RBP3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 CD300CQ08708 224 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 RIGQ13278 110 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 KIAA0141Q14154 515 aaPredicted RBP3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 GK2Q14410 553 aaPredicted RBP3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 STXBP2Q15833 593 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 UPP1Q16831 310 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 KNOP1Q1ED39 458 aaKnown RBP3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 CAPN13Q6MZZ7 669 aaPredicted RBP3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 GPRIN3Q6ZVF9 776 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 CCDC91Q7Z6B0 441 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 KCNMB4Q86W47 210 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 FAM131BQ86XD5 332 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 WDR49Q8IV35 697 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 C10orf53Q8N6V4 93 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 SNX21Q969T3 373 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 NABP1Q96AH0 204 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 SLC45A3Q96JT2 553 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 CABS1Q96KC9 395 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 GUCD1Q96NT3 240 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 LGMNQ99538 433 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 SSX3Q99909 188 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 DDX50Q9BQ39 737 aaKnown RBP3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 PINK1Q9BXM7 581 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 MRPL9Q9BYD2 267 aaKnown RBP3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 VIPAS39Q9H9C1 493 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 GNB4Q9HAV0 340 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 ZNF319Q9P2F9 582 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 CTSZQ9UBR2 303 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 MUTYHQ9UIF7 546 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 FBXW2Q9UKT8 454 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 ITM2BQ9Y287 266 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 SH3GLB1Q9Y371 365 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 OR1A2Q9Y585 309 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 ZHX2Q9Y6X8 837 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 NOTCH3Q9UM47 2321 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 UMODL1Q5DID0 1318 aa3.17□□□□□ -1.9
RNU6-88P-201ENST00000606801 FGD5Q6ZNL6 1462 aa3.16□□□□□ -1.9
RNU6-88P-201ENST00000606801 IGLV4-3A0A075B6K6 122 aa3.16□□□□□ -1.9
RNU6-88P-201ENST00000606801 SH3PXD2BA1X283 911 aa3.16□□□□□ -1.9
RNU6-88P-201ENST00000606801 SLC15A5A6NIM6 579 aa3.16□□□□□ -1.9
RNU6-88P-201ENST00000606801 TRAFD1O14545 582 aaPredicted RBP3.16□□□□□ -1.9
RNU6-88P-201ENST00000606801 ZNF749O43361 778 aa3.16□□□□□ -1.9
RNU6-88P-201ENST00000606801 B4GAT1O43505 415 aa3.16□□□□□ -1.9
RNU6-88P-201ENST00000606801 OR6B1O95007 311 aa3.16□□□□□ -1.9
RNU6-88P-201ENST00000606801 CHRNGP07510 517 aa3.16□□□□□ -1.9
RNU6-88P-201ENST00000606801 HMOX1P09601 288 aa3.16□□□□□ -1.9
RNU6-88P-201ENST00000606801 SBK2P0C263 348 aa3.16□□□□□ -1.9
RNU6-88P-201ENST00000606801 TRIM49P0CI25 452 aa3.16□□□□□ -1.9
RNU6-88P-201ENST00000606801 TRIM49CP0CI26 452 aa3.16□□□□□ -1.9
RNU6-88P-201ENST00000606801 CYP3A5P20815 502 aa3.16□□□□□ -1.9
RNU6-88P-201ENST00000606801 FHITP49789 147 aa3.16□□□□□ -1.9
RNU6-88P-201ENST00000606801 TNFSF10P50591 281 aa3.16□□□□□ -1.9
RNU6-88P-201ENST00000606801 NDUFV3P56181 108 aaKnown RBP3.16□□□□□ -1.9
RNU6-88P-201ENST00000606801 PDE7AQ13946 482 aa3.16□□□□□ -1.9
RNU6-88P-201ENST00000606801 GIT2Q14161 759 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms