RNA–Protein interactions for RNA: ENST00000605833.1

VIM-AS1-202, VIM antisense RNA 1, humanhuman

TSL 3 BASIC

Gene VIM-AS1, Length 918 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-AS1-202ENST00000605833 BTN3A2P78410 334 aa19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 PMPCAQ10713 525 aa19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 HP1BP3Q5SSJ5 553 aaPredicted RBP19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 SBSNQ6UWP8 590 aa19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 CCDC25Q86WR0 208 aa19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 CNTN4Q8IWV2 1026 aa19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 SCUBE1Q8IWY4 988 aa19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 DMRTC2Q8IXT2 367 aaPredicted RBP19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 PSD4Q8NDX1 1056 aa19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 TMEM52Q8NDY8 209 aa19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 TRPV3Q8NET8 790 aa19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 CREB3L4Q8TEY5 395 aa19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 PYROXD1Q8WU10 500 aa19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 VMP1Q96GC9 406 aa19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 ZNF559Q9BR84 538 aa19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 KCNJ16Q9NPI9 418 aa19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 TIMMDC1Q9NPL8 285 aa19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 RRAGDQ9NQL2 400 aaPredicted RBP19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 CHMP2BQ9UQN3 213 aa19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 MMACHCQ9Y4U1 282 aa19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 CLDN16Q9Y5I7 305 aa19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 ZNF469Q96JG9 3925 aaPredicted RBP19.4■□□□□ 0.7
VIM-AS1-202ENST00000605833 FOXO6A8MYZ6 492 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 NPIPA2E9PIF3 369 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 NPIPA3F8WFD2 350 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 CD1EP15812 388 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 SAT1P21673 171 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 PLGLB1Q02325 96 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 RUNX2Q13950 521 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 TERF2Q15554 542 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 SPANXN3Q5MJ09 141 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 NXPE4Q6UWF7 544 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 CLNKQ7Z7G1 428 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 ANKMY2Q8IV38 441 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 IGDCC3Q8IVU1 814 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 EIF1ADQ8N9N8 165 aaKnown RBP19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 FAM47BQ8NA70 645 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 FBXO36Q8NEA4 188 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 OR5M9Q8NGP3 310 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 OR5M3Q8NGP4 307 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 CERS2Q96G23 380 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 FMO2Q99518 471 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 CLK4Q9HAZ1 481 aaKnown RBP19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 PNPLA3Q9NST1 481 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 SLC22A14Q9Y267 594 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 LIPGQ9Y5X9 500 aa19.39■□□□□ 0.69
VIM-AS1-202ENST00000605833 NPEPPSL1A6NEC2 478 aa19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 TMEM200CA6NKL6 621 aa19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 A8MVJ9 347 aa19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 OR2J2O76002 312 aa19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 OR6B1O95007 311 aa19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 SERPINA6P08185 405 aa19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 ENO2P09104 434 aaPredicted RBP19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 HNRNPH1P31943 449 aaKnown RBP19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 PPIAP62937 165 aaKnown RBP19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 MYBPHQ13203 477 aa19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 PPP1R3AQ16821 1122 aa19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 XKR6Q5GH73 641 aa19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 IL20RBQ6UXL0 311 aa19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 ASB15Q8WXK1 588 aa19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 CCT6BQ92526 530 aa19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 CFAP36Q96G28 342 aa19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 CCDC77Q9BR77 488 aa19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 PLAC1Q9HBJ0 212 aa19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 PPANQ9NQ55 473 aaKnown RBP19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 PRTFDC1Q9NRG1 225 aa19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 HPF1Q9NWY4 346 aa19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 NFU1Q9UMS0 254 aa19.38■□□□□ 0.69
VIM-AS1-202ENST00000605833 MYOCOSA0A1B0GUC4 107 aa19.37■□□□□ 0.69
VIM-AS1-202ENST00000605833 CDC7O00311 574 aa19.37■□□□□ 0.69
VIM-AS1-202ENST00000605833 ERI3O43414 337 aaKnown RBP19.37■□□□□ 0.69
VIM-AS1-202ENST00000605833 NADKO95544 446 aaPredicted RBP19.37■□□□□ 0.69
VIM-AS1-202ENST00000605833 ECHS1P30084 290 aa19.37■□□□□ 0.69
VIM-AS1-202ENST00000605833 SOX3P41225 446 aa19.37■□□□□ 0.69
VIM-AS1-202ENST00000605833 MAGEA4P43358 317 aa19.37■□□□□ 0.69
VIM-AS1-202ENST00000605833 GPR143P51810 404 aa19.37■□□□□ 0.69
VIM-AS1-202ENST00000605833 SLC13A2Q13183 592 aa19.37■□□□□ 0.69
VIM-AS1-202ENST00000605833 C18orf21Q32NC0 220 aaPredicted RBP19.37■□□□□ 0.69
VIM-AS1-202ENST00000605833 KIAA0408Q6ZU52 694 aa19.37■□□□□ 0.69
VIM-AS1-202ENST00000605833 OR2M7Q8NG81 312 aa19.37■□□□□ 0.69
VIM-AS1-202ENST00000605833 GABPB2Q8TAK5 448 aaPredicted RBP19.37■□□□□ 0.69
VIM-AS1-202ENST00000605833 FAR2Q96K12 515 aa19.37■□□□□ 0.69
VIM-AS1-202ENST00000605833 ANKZF1Q9H8Y5 726 aa19.37■□□□□ 0.69
VIM-AS1-202ENST00000605833 PPIEQ9UNP9 301 aaKnown RBP19.37■□□□□ 0.69
VIM-AS1-202ENST00000605833 YARS2Q9Y2Z4 477 aaKnown RBP19.37■□□□□ 0.69
VIM-AS1-202ENST00000605833 MAP1AP78559 2803 aaPredicted RBP19.37■□□□□ 0.69
VIM-AS1-202ENST00000605833 ACOT7O00154 380 aa19.36■□□□□ 0.69
VIM-AS1-202ENST00000605833 WWP2O00308 870 aa19.36■□□□□ 0.69
VIM-AS1-202ENST00000605833 ZFAND5O76080 213 aa19.36■□□□□ 0.69
VIM-AS1-202ENST00000605833 HOXD4P09016 255 aaPredicted RBP19.36■□□□□ 0.69
VIM-AS1-202ENST00000605833 DNAJA1P31689 397 aaKnown RBP19.36■□□□□ 0.69
VIM-AS1-202ENST00000605833 FASTKD3Q14CZ7 662 aaKnown RBP19.36■□□□□ 0.69
VIM-AS1-202ENST00000605833 TEDDM1Q5T9Z0 273 aa19.36■□□□□ 0.69
VIM-AS1-202ENST00000605833 STEAP4Q687X5 459 aa19.36■□□□□ 0.69
VIM-AS1-202ENST00000605833 FAM45BPQ6NSW5 357 aa19.36■□□□□ 0.69
VIM-AS1-202ENST00000605833 TRMT10BQ6PF06 316 aaKnown RBP19.36■□□□□ 0.69
VIM-AS1-202ENST00000605833 FAM45AQ8TCE6 357 aa19.36■□□□□ 0.69
VIM-AS1-202ENST00000605833 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.36■□□□□ 0.69
VIM-AS1-202ENST00000605833 GAL3ST3Q96A11 431 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms