RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 PCDHB14Q9Y5E9 798 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 CABIN1Q9Y6J0 2220 aa13.02□□□□□ -0.33
IRF3-229ENST00000601373 CROCCQ5TZA2 2017 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 IGHV1OR21-1A0A087WYE8 117 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 SLC9B1P1A6NJY1 282 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 ARHGAP33O14559 1287 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 SLC30A4O14863 429 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 NVLO15381 856 aaKnown RBP13.01□□□□□ -0.33
IRF3-229ENST00000601373 CPSF4O95639 269 aaKnown RBP13.01□□□□□ -0.33
IRF3-229ENST00000601373 HOXB9P17482 250 aaPredicted RBP13.01□□□□□ -0.33
IRF3-229ENST00000601373 TCN1P20061 433 aaPredicted RBP13.01□□□□□ -0.33
IRF3-229ENST00000601373 PTPN6P29350 595 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 ALDH4A1P30038 563 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 GSK3BP49841 420 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 RAB8AP61006 207 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 PPP1CAP62136 330 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 AP2B1P63010 937 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 BTN3A2P78410 334 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 MS4A2Q01362 244 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 CCNIQ14094 377 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 MAP7Q14244 749 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 NR0B2Q15466 257 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 RABL3Q5HYI8 236 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 LAIR1Q6GTX8 287 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 ANKRD26P1Q6NSI1 321 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 NIPAL1Q6NVV3 410 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 ZNF793Q6ZN11 406 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 ZNF621Q6ZSS3 439 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 DHFR2Q86XF0 187 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 PTRH1Q86Y79 214 aaKnown RBP13.01□□□□□ -0.33
IRF3-229ENST00000601373 TICAM1Q8IUC6 712 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 MCATQ8IVS2 390 aaKnown RBP13.01□□□□□ -0.33
IRF3-229ENST00000601373 DNAJC22Q8N4W6 341 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 CSNK1A1LQ8N752 337 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 TRIML2Q8N7C3 387 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 ENDOVQ8N8Q3 282 aaKnown RBP13.01□□□□□ -0.33
IRF3-229ENST00000601373 FAM181AQ8N9Y4 354 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 KCT2Q8NC54 265 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 OR8K5Q8NH50 307 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 NCSTNQ92542 709 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 MIEF2Q96C03 454 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 LRGUKQ96M69 825 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 MAP3K3Q99759 626 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 KCTD14Q9BQ13 255 aaPredicted RBP13.01□□□□□ -0.33
IRF3-229ENST00000601373 MACROD1Q9BQ69 325 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 THUMPD3Q9BV44 507 aaKnown RBP13.01□□□□□ -0.33
IRF3-229ENST00000601373 SYNPO2LQ9H987 977 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 RNPEPL1Q9HAU8 725 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 SLC25A37Q9NYZ2 338 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 VPS4AQ9UN37 437 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 CORO2BQ9UQ03 480 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 ASB4Q9Y574 426 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 GMEB1Q9Y692 573 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 TMEM131Q92545 1883 aa13.01□□□□□ -0.33
IRF3-229ENST00000601373 LOC105369274A0A096LPK9 316 aa13□□□□□ -0.33
IRF3-229ENST00000601373 A0A0G2JN53 185 aa13□□□□□ -0.33
IRF3-229ENST00000601373 LOC102723532A0A0G2JNH3 316 aa13□□□□□ -0.33
IRF3-229ENST00000601373 A0A1W2PRB8 838 aa13□□□□□ -0.33
IRF3-229ENST00000601373 C1orf226A1L170 272 aa13□□□□□ -0.33
IRF3-229ENST00000601373 DCDC2BA2VCK2 349 aa13□□□□□ -0.33
IRF3-229ENST00000601373 B4GAT1O43505 415 aa13□□□□□ -0.33
IRF3-229ENST00000601373 B3GALT2O43825 422 aa13□□□□□ -0.33
IRF3-229ENST00000601373 EPN2O95208 641 aa13□□□□□ -0.33
IRF3-229ENST00000601373 STATHP02808 62 aa13□□□□□ -0.33
IRF3-229ENST00000601373 ZNF888P0CJ79 500 aaPredicted RBP13□□□□□ -0.33
IRF3-229ENST00000601373 ALOX12P18054 663 aa13□□□□□ -0.33
IRF3-229ENST00000601373 CDKN2CP42773 168 aa13□□□□□ -0.33
IRF3-229ENST00000601373 ALDH9A1P49189 494 aa13□□□□□ -0.33
IRF3-229ENST00000601373 OR1D5P58170 312 aa13□□□□□ -0.33
IRF3-229ENST00000601373 SQSTM1Q13501 440 aa13□□□□□ -0.33
IRF3-229ENST00000601373 ZNF385BQ569K4 471 aa13□□□□□ -0.33
IRF3-229ENST00000601373 TRIM61Q5EBN2 209 aa13□□□□□ -0.33
IRF3-229ENST00000601373 FRMPD2BQ6IN97 320 aa13□□□□□ -0.33
IRF3-229ENST00000601373 TMEM214Q6NUQ4 689 aaKnown RBP13□□□□□ -0.33
IRF3-229ENST00000601373 ZFP1Q6P2D0 407 aa13□□□□□ -0.33
IRF3-229ENST00000601373 DNAJC14Q6Y2X3 702 aaPredicted RBP13□□□□□ -0.33
IRF3-229ENST00000601373 FAM92BQ6ZTR7 304 aa13□□□□□ -0.33
IRF3-229ENST00000601373 PROSER1Q86XN7 944 aa13□□□□□ -0.33
IRF3-229ENST00000601373 MSRB3Q8IXL7 192 aa13□□□□□ -0.33
IRF3-229ENST00000601373 OR4N4Q8N0Y3 316 aa13□□□□□ -0.33
IRF3-229ENST00000601373 AMER3Q8N944 861 aa13□□□□□ -0.33
IRF3-229ENST00000601373 FAM156AQ8NDB6 213 aa13□□□□□ -0.33
IRF3-229ENST00000601373 SLC26A7Q8TE54 656 aa13□□□□□ -0.33
IRF3-229ENST00000601373 OR5P2Q8WZ92 322 aa13□□□□□ -0.33
IRF3-229ENST00000601373 TGM7Q96PF1 710 aa13□□□□□ -0.33
IRF3-229ENST00000601373 CPPED1Q9BRF8 314 aaPredicted RBP13□□□□□ -0.33
IRF3-229ENST00000601373 FAM60AQ9NP50 221 aa13□□□□□ -0.33
IRF3-229ENST00000601373 PDE7BQ9NP56 450 aa13□□□□□ -0.33
IRF3-229ENST00000601373 PRDM9Q9NQV7 894 aa13□□□□□ -0.33
IRF3-229ENST00000601373 MS4A12Q9NXJ0 267 aa13□□□□□ -0.33
IRF3-229ENST00000601373 ACTR3BQ9P1U1 418 aa13□□□□□ -0.33
IRF3-229ENST00000601373 PHF11Q9UIL8 331 aa13□□□□□ -0.33
IRF3-229ENST00000601373 PLCL2Q9UPR0 1127 aa13□□□□□ -0.33
IRF3-229ENST00000601373 PCDHB3Q9Y5E6 796 aa13□□□□□ -0.33
IRF3-229ENST00000601373 PCDHGA5Q9Y5G8 931 aa13□□□□□ -0.33
IRF3-229ENST00000601373 SLC22A7Q9Y694 548 aa13□□□□□ -0.33
IRF3-229ENST00000601373 ZFHX4Q86UP3 3567 aa13□□□□□ -0.33
IRF3-229ENST00000601373 AQP12BA6NM10 295 aa12.99□□□□□ -0.33
IRF3-229ENST00000601373 CLIC1O00299 241 aa12.99□□□□□ -0.33
IRF3-229ENST00000601373 PDPK1O15530 556 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms