RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 CCDC3Q9BQI4 270 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 CHRNA10Q9GZZ6 450 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 GAREM1Q9H706 876 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 KAT8Q9H7Z6 458 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 ZNF282Q9UDV7 671 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 VPS4AQ9UN37 437 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 SNRNP200O75643 2136 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 CLIC1O00299 241 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 TXNDC9O14530 226 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 SH3BP5O60239 455 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 SRPX2O60687 465 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 EIF2S1P05198 315 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 EFNA1P20827 205 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 PPIBP23284 216 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 CERS1P27544 350 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 ATXN3P54252 364 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 GPLD1P80108 840 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 AASDHQ4L235 1098 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 ZFP1Q6P2D0 407 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 SPATA24Q86W54 205 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 PROSER1Q86XN7 944 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 GATAD2AQ86YP4 633 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 APLFQ8IW19 511 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 CARFQ8N187 725 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 OR4C6Q8NH72 309 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 TGM7Q96PF1 710 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 IKZF5Q9H5V7 419 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 FSCN3Q9NQT6 498 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 EGFL7Q9UHF1 273 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 SNX13Q9Y5W8 968 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 GMEB1Q9Y692 573 aa16.75■□□□□ 0.27
SHKBP1-224ENST00000600718 ENGP17813 658 aa16.74■□□□□ 0.27
SHKBP1-224ENST00000600718 VSX2P58304 361 aaPredicted RBP16.74■□□□□ 0.27
SHKBP1-224ENST00000600718 TAF11Q15544 211 aa16.74■□□□□ 0.27
SHKBP1-224ENST00000600718 NKAIN2Q5VXU1 208 aa16.74■□□□□ 0.27
SHKBP1-224ENST00000600718 LCN8Q6JVE9 175 aa16.74■□□□□ 0.27
SHKBP1-224ENST00000600718 TMEM214Q6NUQ4 689 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-224ENST00000600718 SLC23A3Q6PIS1 610 aa16.74■□□□□ 0.27
SHKBP1-224ENST00000600718 PLXDC1Q8IUK5 500 aa16.74■□□□□ 0.27
SHKBP1-224ENST00000600718 OR10A6Q8NH74 314 aa16.74■□□□□ 0.27
SHKBP1-224ENST00000600718 PYDC1Q8WXC3 89 aa16.74■□□□□ 0.27
SHKBP1-224ENST00000600718 AURKBQ96GD4 344 aaPredicted RBP16.74■□□□□ 0.27
SHKBP1-224ENST00000600718 NAF1Q96HR8 494 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-224ENST00000600718 PIF1Q9H611 641 aa16.74■□□□□ 0.27
SHKBP1-224ENST00000600718 ATG4BQ9Y4P1 393 aa16.74■□□□□ 0.27
SHKBP1-224ENST00000600718 LRRC42Q9Y546 428 aa16.74■□□□□ 0.27
SHKBP1-224ENST00000600718 A0A1W2PR48 441 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 C1orf226A1L170 272 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 AQP12BA6NM10 295 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 PROM1O43490 865 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 B4GAT1O43505 415 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 DUX1O43812 170 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 C6orf47O95873 294 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 C8BP07358 591 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 PNLIPP16233 465 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 ALOX12P18054 663 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 GFERP55789 205 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 OR4D2P58180 307 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 HBA1P69905 142 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 RHDQ02161 417 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 SLC34A1Q06495 639 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 ABHD18Q0P651 414 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 CALHM3Q86XJ0 350 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 AQP12AQ8IXF9 295 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 TRIML2Q8N7C3 387 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 OR2T12Q8NG77 320 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 ZCCHC10Q8TBK6 192 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 OR5P2Q8WZ92 322 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 FAM120BQ96EK7 910 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 TAS2R9Q9NYW1 312 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 FBXW2Q9UKT8 454 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 ANGPTL2Q9UKU9 493 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 SLC22A7Q9Y694 548 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 TCRBV3S1A0A5B6 114 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 ARPC2O15144 300 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 PDPK1O15530 556 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 B3GALT2O43825 422 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 CER1O95813 267 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 SYPP08247 313 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 ANPEPP15144 967 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 GPX2P18283 190 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 FRKP42685 505 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 CCT8P50990 548 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 NR0B2Q15466 257 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 TRIM61Q5EBN2 209 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 CYP2R1Q6VVX0 501 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 DGLUCYQ7Z3D6 616 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 FAM181AQ8N9Y4 354 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 GOLM1Q8NBJ4 401 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 TPT1P8Q9HAU6 139 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 PDE7BQ9NP56 450 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 PHF11Q9UIL8 331 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 MAGEL2Q9UJ55 1249 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 CORO2BQ9UQ03 480 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 TMEM131Q92545 1883 aa16.73■□□□□ 0.27
SHKBP1-224ENST00000600718 FAM220BPB1ANY3 271 aa16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 ARHGAP33O14559 1287 aa16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 GMNNO75496 209 aa16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 GZMMP51124 257 aa16.72■□□□□ 0.27
SHKBP1-224ENST00000600718 PCBP4P57723 403 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms