RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 UNC50Q53HI1 259 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 CRB2Q5IJ48 1285 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 FRG2Q64ET8 278 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 PAPD4Q6PIY7 484 aaKnown RBP15.7■□□□□ 0.1
SSBP4-204ENST00000597724 SLC22A9Q8IVM8 553 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 SCUBE1Q8IWY4 988 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 ZNF595Q8IYB9 648 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 SIRT6Q8N6T7 355 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 M1APQ8TC57 530 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 PNPLA2Q96AD5 504 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 MTFMTQ96DP5 389 aaKnown RBP15.7■□□□□ 0.1
SSBP4-204ENST00000597724 TMEM237Q96Q45 408 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 FRG2BQ96QU4 278 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 LMF1Q96S06 567 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 LPAR4Q99677 370 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 MAPKAP1Q9BPZ7 522 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 CENPKQ9BS16 269 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 LYRM4Q9HD34 91 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 PTGFRNQ9P2B2 879 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 ZNF225Q9UK10 706 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 MRPS33Q9Y291 106 aaKnown RBP15.7■□□□□ 0.1
SSBP4-204ENST00000597724 UBR5O95071 2799 aaPredicted RBP15.7■□□□□ 0.1
SSBP4-204ENST00000597724 BAHCC1Q9P281 2608 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 MYO18BQ8IUG5 2567 aa15.7■□□□□ 0.1
SSBP4-204ENST00000597724 G3V2L1 256 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 CLDN4O14493 209 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 SUPT7LO94864 414 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 ETHE1O95571 254 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 PROCP04070 461 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 KRT4P19013 534 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 RAP1GDS1P52306 607 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 CLCQ05315 142 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 SLC18A2Q05940 514 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 EXT1Q16394 746 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 CCDC153Q494R4 210 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 PLEKHN1Q494U1 663 aaPredicted RBP15.69■□□□□ 0.1
SSBP4-204ENST00000597724 C10orf62Q5T681 223 aaPredicted RBP15.69■□□□□ 0.1
SSBP4-204ENST00000597724 LETMD1Q6P1Q0 360 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 LINC00696Q6ZRV3 163 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 RIBC1Q8N443 379 aaPredicted RBP15.69■□□□□ 0.1
SSBP4-204ENST00000597724 MREGQ8N565 214 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 FAM47BQ8NA70 645 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 Q8NA96 180 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 ARMC2Q8NEN0 867 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 MYRIPQ8NFW9 859 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 TRPC4APQ8TEL6 797 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 PPP4R1Q8TF05 950 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 L3HYPDHQ96EM0 354 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 MAGEB10Q96LZ2 347 aaPredicted RBP15.69■□□□□ 0.1
SSBP4-204ENST00000597724 CSF3RQ99062 836 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 SORBS1Q9BX66 1292 aaKnown RBP15.69■□□□□ 0.1
SSBP4-204ENST00000597724 ROPN1BQ9BZX4 212 aaPredicted RBP15.69■□□□□ 0.1
SSBP4-204ENST00000597724 TRIM4Q9C037 500 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 EPS8L2Q9H6S3 715 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 ROPN1Q9HAT0 212 aaPredicted RBP15.69■□□□□ 0.1
SSBP4-204ENST00000597724 PRTFDC1Q9NRG1 225 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 RAB21Q9UL25 225 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 B3GNT3Q9Y2A9 372 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 CLDN16Q9Y5I7 305 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 NBASA2RRP1 2371 aa15.69■□□□□ 0.1
SSBP4-204ENST00000597724 TTLL8A6PVC2 850 aa15.68■□□□□ 0.1
SSBP4-204ENST00000597724 TGFBR3LH3BV60 316 aa15.68■□□□□ 0.1
SSBP4-204ENST00000597724 COPEO14579 308 aa15.68■□□□□ 0.1
SSBP4-204ENST00000597724 PLIN3O60664 434 aa15.68■□□□□ 0.1
SSBP4-204ENST00000597724 MLLT10P55197 1068 aa15.68■□□□□ 0.1
SSBP4-204ENST00000597724 SLC26A5P58743 744 aa15.68■□□□□ 0.1
SSBP4-204ENST00000597724 IFFO1Q0D2I5 559 aa15.68■□□□□ 0.1
SSBP4-204ENST00000597724 IFT88Q13099 833 aa15.68■□□□□ 0.1
SSBP4-204ENST00000597724 SLAMF1Q13291 335 aa15.68■□□□□ 0.1
SSBP4-204ENST00000597724 B3GNTL1Q67FW5 361 aaPredicted RBP15.68■□□□□ 0.1
SSBP4-204ENST00000597724 TTC19Q6DKK2 380 aaPredicted RBP15.68■□□□□ 0.1
SSBP4-204ENST00000597724 H3F3CQ6NXT2 135 aa15.68■□□□□ 0.1
SSBP4-204ENST00000597724 ZYG11AQ6WRX3 759 aa15.68■□□□□ 0.1
SSBP4-204ENST00000597724 Q6ZS92 163 aa15.68■□□□□ 0.1
SSBP4-204ENST00000597724 CCDC126Q96EE4 140 aa15.68■□□□□ 0.1
SSBP4-204ENST00000597724 SERPINI1Q99574 410 aa15.68■□□□□ 0.1
SSBP4-204ENST00000597724 ZNF717Q9BY31 904 aaPredicted RBP15.68■□□□□ 0.1
SSBP4-204ENST00000597724 MMP25Q9NPA2 562 aa15.68■□□□□ 0.1
SSBP4-204ENST00000597724 SLAMF7Q9NQ25 335 aa15.68■□□□□ 0.1
SSBP4-204ENST00000597724 LGALS13Q9UHV8 139 aa15.68■□□□□ 0.1
SSBP4-204ENST00000597724 CSAG2Q9Y5P2 127 aa15.68■□□□□ 0.1
SSBP4-204ENST00000597724 SPENQ96T58 3664 aaKnown RBP15.67■□□□□ 0.1
SSBP4-204ENST00000597724 PYCARD-AS1I3L0S3 204 aa15.67■□□□□ 0.1
SSBP4-204ENST00000597724 CTNSO60931 367 aa15.67■□□□□ 0.1
SSBP4-204ENST00000597724 OR4F21O95013 312 aa15.67■□□□□ 0.1
SSBP4-204ENST00000597724 MYL2P10916 166 aa15.67■□□□□ 0.1
SSBP4-204ENST00000597724 BSGP35613 385 aa15.67■□□□□ 0.1
SSBP4-204ENST00000597724 SLC13A2Q13183 592 aa15.67■□□□□ 0.1
SSBP4-204ENST00000597724 TRABD2AQ86V40 505 aa15.67■□□□□ 0.1
SSBP4-204ENST00000597724 C4orf33Q8N1A6 199 aa15.67■□□□□ 0.1
SSBP4-204ENST00000597724 ZCCHC7Q8N3Z6 543 aaKnown RBP15.67■□□□□ 0.1
SSBP4-204ENST00000597724 DNAJB14Q8TBM8 379 aa15.67■□□□□ 0.1
SSBP4-204ENST00000597724 RDH11Q8TC12 318 aa15.67■□□□□ 0.1
SSBP4-204ENST00000597724 ZNF382Q96SR6 550 aa15.67■□□□□ 0.1
SSBP4-204ENST00000597724 C12orf65Q9H3J6 166 aaKnown RBP15.67■□□□□ 0.1
SSBP4-204ENST00000597724 ELOVL6Q9H5J4 265 aa15.67■□□□□ 0.1
SSBP4-204ENST00000597724 DDX31Q9H8H2 851 aaKnown RBP15.67■□□□□ 0.1
SSBP4-204ENST00000597724 KCNK13Q9HB14 408 aa15.67■□□□□ 0.1
SSBP4-204ENST00000597724 FARSBQ9NSD9 589 aaKnown RBP15.67■□□□□ 0.1
SSBP4-204ENST00000597724 MS4A12Q9NXJ0 267 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms