RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 CCDC120Q96HB5 630 aa16.77■□□□□ 0.28
HOMER3-208ENST00000595756 SEC16BQ96JE7 1060 aa16.77■□□□□ 0.28
HOMER3-208ENST00000595756 SCYL1Q96KG9 808 aa16.77■□□□□ 0.28
HOMER3-208ENST00000595756 GPR137Q96N19 417 aa16.77■□□□□ 0.28
HOMER3-208ENST00000595756 FRMD6Q96NE9 622 aa16.77■□□□□ 0.28
HOMER3-208ENST00000595756 PTCHD1Q96NR3 888 aa16.77■□□□□ 0.28
HOMER3-208ENST00000595756 GPR78Q96P69 363 aa16.77■□□□□ 0.28
HOMER3-208ENST00000595756 MRPL57Q9BQC6 102 aaKnown RBP16.77■□□□□ 0.28
HOMER3-208ENST00000595756 HES7Q9BYE0 225 aa16.77■□□□□ 0.28
HOMER3-208ENST00000595756 PRDM9Q9NQV7 894 aa16.77■□□□□ 0.28
HOMER3-208ENST00000595756 ANKRD10Q9NXR5 420 aa16.77■□□□□ 0.28
HOMER3-208ENST00000595756 PTBP2Q9UKA9 531 aaKnown RBP16.77■□□□□ 0.28
HOMER3-208ENST00000595756 KLF2Q9Y5W3 355 aaPredicted RBP16.77■□□□□ 0.28
HOMER3-208ENST00000595756 NCOA6Q14686 2063 aaPredicted RBP16.76■□□□□ 0.27
HOMER3-208ENST00000595756 SUPT3HB4E1H0 165 aa16.76■□□□□ 0.27
HOMER3-208ENST00000595756 HNRNPRO43390 633 aaKnown RBP16.76■□□□□ 0.27
HOMER3-208ENST00000595756 SUPT3HO75486 399 aa16.76■□□□□ 0.27
HOMER3-208ENST00000595756 STK16O75716 305 aa16.76■□□□□ 0.27
HOMER3-208ENST00000595756 NEURL1O76050 574 aa16.76■□□□□ 0.27
HOMER3-208ENST00000595756 WDR47O94967 919 aa16.76■□□□□ 0.27
HOMER3-208ENST00000595756 CCT5P48643 541 aa16.76■□□□□ 0.27
HOMER3-208ENST00000595756 STXBP1P61764 594 aaKnown RBP16.76■□□□□ 0.27
HOMER3-208ENST00000595756 ART3Q13508 389 aa16.76■□□□□ 0.27
HOMER3-208ENST00000595756 TOR1AIP1Q5JTV8 583 aa16.76■□□□□ 0.27
HOMER3-208ENST00000595756 METTL2BQ6P1Q9 378 aaKnown RBP16.76■□□□□ 0.27
HOMER3-208ENST00000595756 RPTNQ6XPR3 784 aa16.76■□□□□ 0.27
HOMER3-208ENST00000595756 RPS19BP1Q86WX3 136 aaKnown RBP16.76■□□□□ 0.27
HOMER3-208ENST00000595756 CA13Q8N1Q1 262 aa16.76■□□□□ 0.27
HOMER3-208ENST00000595756 FAM98AQ8NCA5 519 aaKnown RBP16.76■□□□□ 0.27
HOMER3-208ENST00000595756 MZB1Q8WU39 189 aa16.76■□□□□ 0.27
HOMER3-208ENST00000595756 AICDAQ9GZX7 198 aa16.76■□□□□ 0.27
HOMER3-208ENST00000595756 MRPL46Q9H2W6 279 aaKnown RBP16.76■□□□□ 0.27
HOMER3-208ENST00000595756 KLHL31Q9H511 634 aa16.76■□□□□ 0.27
HOMER3-208ENST00000595756 KLHL1Q9NR64 748 aa16.76■□□□□ 0.27
HOMER3-208ENST00000595756 GPRC5BQ9NZH0 403 aa16.76■□□□□ 0.27
HOMER3-208ENST00000595756 LGALS13Q9UHV8 139 aa16.76■□□□□ 0.27
HOMER3-208ENST00000595756 MMACHCQ9Y4U1 282 aa16.76■□□□□ 0.27
HOMER3-208ENST00000595756 TNPO3Q9Y5L0 923 aaKnown RBP16.76■□□□□ 0.27
HOMER3-208ENST00000595756 PRSS44E7EML9 344 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 CTIFO43310 598 aaKnown RBP16.75■□□□□ 0.27
HOMER3-208ENST00000595756 SLC19A2O60779 497 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 PYGBP11216 843 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 GFAPP14136 432 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 MAOAP21397 527 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 TPP2P29144 1249 aaPredicted RBP16.75■□□□□ 0.27
HOMER3-208ENST00000595756 GMPRP36959 345 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 HNF4AP41235 474 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 KCNC1P48547 511 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 CASP6P55212 293 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 BTG2P78543 158 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 OC90Q02509 493 aaPredicted RBP16.75■□□□□ 0.27
HOMER3-208ENST00000595756 SLBPQ14493 270 aaKnown RBP eCLIP16.75■□□□□ 0.27
HOMER3-208ENST00000595756 TERF2Q15554 542 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 KRTCAP3Q53RY4 240 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 TECRLQ5HYJ1 363 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 SPINK14Q6IE38 97 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 TMIGD1Q6UXZ0 262 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 SLCO4C1Q6ZQN7 724 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 PLD6Q8N2A8 252 aaKnown RBP16.75■□□□□ 0.27
HOMER3-208ENST00000595756 ARMC10Q8N2F6 343 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 KIF2BQ8N4N8 673 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 ZNF808Q8N4W9 903 aaPredicted RBP16.75■□□□□ 0.27
HOMER3-208ENST00000595756 ARMC2Q8NEN0 867 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 OR2W6PQ8NHA6 318 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 ADAMTS18Q8TE60 1221 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 EXT2Q93063 718 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 MARVELD3Q96A59 401 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 MAGED4Q96JG8 741 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 NPLQ9BXD5 320 aaPredicted RBP16.75■□□□□ 0.27
HOMER3-208ENST00000595756 CD244Q9BZW8 370 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 PITHD1Q9GZP4 211 aaPredicted RBP16.75■□□□□ 0.27
HOMER3-208ENST00000595756 CDCP1Q9H5V8 836 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 TRIM45Q9H8W5 580 aaPredicted RBP16.75■□□□□ 0.27
HOMER3-208ENST00000595756 ARGLU1Q9NWB6 273 aaPredicted RBP16.75■□□□□ 0.27
HOMER3-208ENST00000595756 LRFN1Q9P244 771 aa16.75■□□□□ 0.27
HOMER3-208ENST00000595756 FBN2P35556 2912 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 CSMD2Q7Z408 3487 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 UBXN8O00124 270 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 CCL21O00585 134 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 KLK8O60259 260 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 NME2P1O60361 137 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 SMIM24O75264 130 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 GLRA3O75311 464 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 SLC25A12O75746 678 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 SP1P08047 785 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 C1GALT1C1LP0DN25 315 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 NME2P22392 152 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 HPDP32754 393 aaPredicted RBP16.74■□□□□ 0.27
HOMER3-208ENST00000595756 TRHRP34981 398 aaPredicted RBP16.74■□□□□ 0.27
HOMER3-208ENST00000595756 ALDH18A1P54886 795 aaKnown RBP16.74■□□□□ 0.27
HOMER3-208ENST00000595756 ALDH6A1Q02252 535 aaKnown RBP16.74■□□□□ 0.27
HOMER3-208ENST00000595756 SRSF11Q05519 484 aaKnown RBP16.74■□□□□ 0.27
HOMER3-208ENST00000595756 SLC25A25Q6KCM7 469 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 LRRC70Q7Z2Q7 622 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 GALNTL5Q7Z4T8 443 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 SIAH3Q8IW03 269 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 SCUBE1Q8IWY4 988 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 CYP4X1Q8N118 509 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 KRT78Q8N1N4 520 aa16.74■□□□□ 0.27
HOMER3-208ENST00000595756 NFAM1Q8NET5 270 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms